Miscanthus floridulus: 136489016
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Entry
136489016 CDS
T10264
Name
(RefSeq) uncharacterized protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
136489016
Enzymes [BR:
mflo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
136489016
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Av_adeno_fibre
Motif
Other DBs
NCBI-GeneID:
136489016
NCBI-ProteinID:
XP_066341864
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Position
10:complement(90294779..90297876)
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AA seq
706 aa
AA seq
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MAAAAAQARSFLILLVVTASLLPRLAGVSAQAAAAARGVTLRVDPRQVVVDNGAVQVALS
APEGRITGVSYSGEPNLLEYDAGDGDSGGYWDSVWNYPGSGLPGQYNTLDSTEFNVVSSS
EDQVELSFRSTYNPSHQNSIRLNIDKRLVMLRGSSGFYCYAIFEHDRAYPALNITEARLV
FKLNTAKFNYMAITDDIQRYMPSAVDREEPRAVPLAYKEAVLLVDPKEPQFRGEVDDKYQ
YSLDNKDNVVHGWISDSDPNPIGFWVITPSNEFKSGGPLKRELTSHVGPTSLTMFMGTHY
VGKYMVPNIDDGEEWKKVLGPVFIYLNSGPSRADLWEDAKAQAEAEATNWPYGFLASPDF
PKLAERGSVTGRLLVRDKHLSKKHDMPAAAAFVGLASPGQPGSWATESKGYQFWTRAASD
GTFSIANVRVGVYDLYAFVPGVLGDYRRYDGSPLTVAPGRAVAVGDLVFEPPRSGPTLWE
IGVPDRTAAEFYVPDPDPKYVNRVFVDDRDRYRQYGLWERYADLYPDKDLVFTVGESNES
KDWFFAHFTRKVGQVAVPTTWQIRFNLDRVVADGDYTLRIALASSEMCRLQVQVNGDARR
GGVFTTPDMGDDNAITRHGIHGMQRSLEFAVGGHLLRQGDNTIGLELITQQGPEGPAMVA
GVMYDYIRLEGPPSSGAASRGVPTLPSLDRTLVEILFLLAFLVVMS
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgccgctgctcaagctcggtcattcctcatcctgctcgtcgtcacggcgtcg
ctactgccacggctcgccggggtctcggcgcaagcagcagctgccgcccgtggtgttacg
ctacgcgtcgacccgcgccaggtggtcgtggacaatggcgcggtgcaggtggcgctgtcg
gcgccggagggccggatcaccggtgtcagctacagcggcgagcccaacctgctggagtac
gacgccggcgacggagactccggagggtattgggattcggtatggaactatcccggctct
ggtctcccaggacagtacaacacgttggatagtacagagttcaacgtagtgtcctcgagt
gaagatcaagtggagctttctttcaggagtacgtataacccatcacatcaaaatagcatt
cggctaaacatcgacaagaggcttgtgatgctgagaggtagctctgggttctactgctat
gccatctttgagcatgacagggcctaccctgctctcaacatcacggaggctcggctcgtc
ttcaagcttaacacggcaaagttcaattacatggctatcacagacgacatacagaggtac
atgcccagcgcggtggacagagaagaacctcgtgctgttccgctggcttacaaggaggct
gttctgctggttgaccccaaggaaccccaattccgaggagaggtggatgacaagtaccag
tactcgctggataacaaggacaacgttgttcacggatggattagcgacagcgatccaaac
ccaattggtttctgggtcatcacgcccagcaacgagttcaagagcggcggccctctcaag
cgggagctcacctcccacgttggccccacatccctcaccatgtttatggggacgcattat
gtcggcaagtacatggtgcccaacatcgacgacggcgaggagtggaagaaggtcctcggc
ccggtgttcatctacctcaactcaggtcccagcagagccgacctgtgggaggacgccaag
gcgcaggcggaggcggaggcgacgaactggccctacggcttcctggcgtcaccggacttc
cccaagttagccgagagaggatccgttaccgggaggctgttggtcagggacaagcacctg
agcaagaagcacgacatgcccgctgctgcggccttcgtcggcctggcctcgcccgggcag
ccgggctcctgggcgacggaaagcaagggctaccagttctggacgagggccgcgtccgac
ggcacgttcagcatcgccaacgtcagggtaggagtgtacgatctgtacgcgtttgttccg
ggggttcttggagactaccgccgctacgacggctcgccgctgaccgtagcgccaggtcgt
gccgtcgccgtcggtgaccttgtgttcgagcccccgaggtccggcccgacgctgtgggag
atcggcgtccccgaccggacggcggcggagttctacgtcccggacccggaccccaagtac
gtcaacagggtcttcgtcgacgaccgagacaggtaccggcagtacggtctgtgggagagg
tacgccgacttgtacccggacaaggatctcgtcttcacggtcggtgaaagcaacgagtcc
aaggactggttctttgcacacttcacaagaaaggtaggccaggttgccgtgccaacaaca
tggcagatacggttcaatctggaccgcgtcgtggcagacggcgactacacgctgcggatc
gccctcgcatcttctgaaatgtgcagattgcaggtgcaagtgaacggggatgcgaggaga
ggcggggtgtttacgacgcccgacatgggggacgacaacgcgatcacgcgccacgggata
cacggcatgcagcggagcctcgagttcgcggtcgggggccacctgctgcgccaaggcgac
aacaccattggcctagaactcatcacacagcaaggaccggaaggtccggccatggtcgcc
ggggtcatgtatgactacattcgcctagaagggccaccgtccagcggcgctgcctcacgc
ggcgttccaacgttgccgtcccttgaccggactttggtggagattttgtttttgttggcc
ttcctagtcgtcatgtcctag
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