| Entry |
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| Name |
(RefSeq) poly(A)-specific ribonuclease PARN-like isoform X1
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| KO |
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| Organism |
mflo Miscanthus floridulus
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:mflo00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
136490752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:mflo03019]
136490752
Enzymes [BR:mflo01000]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
136490752
Messenger RNA biogenesis [BR:mflo03019]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
136490752
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
11:complement(53369782..53378868)
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| AA seq |
758 aa
MGHMVSRTPPIHQTKSSPTHRRVPSPLHPPATAAAMQMQGRLRRVLRAPPPRILLYHAIS
SPPNGGNGGGGGGGGGGCGSGVAVKQVTRGNMAEALEKLRGRVREAAFVGVDLEMSGVTS
APWRDTFELDRADVRYLKLRDSAERFAALQLGVCPFRWDPAKSAFVAQPHNFYIFPRKEL
PSDCSSHEFLCQTTSIDFLAKYQFDFNTCFREGVSYLSRAQEEEALQKFNMLYHGQTATS
STNSEEDRDIPLKSASDILFTERMKMNFKEWRDVIVSKPMVDNHLSGNIKCCAGQFQTVF
FKMRPAIMLNGFSSHQLKLIQQVLRKNFKDLVFVCTSGEDDTSEKKVVYSDTDEDRILLM
KDVQEDLLKNREERVKSAIGIRHVIDLLSSERKLIVGHSCFLDIAQVYSKFVGPLPSSIK
EFALSFHKIFPHIADTRHLMSVNQAVQKLMKHKSKSLSSAFSLLCPASYSSVEKPSSHPP
VTIEVEGDETTSSCFISGAKHEAGYDAYMTGCIFAQLCAYLGIKFEQFSPLENLATNTKL
HKHINFLSPSWNSGTVIDLSTGMERPEPGYMRRFPAAVYDNIIVIWGFPSKVRPKEIKDC
ICKVFGSGSVTTVFSIDSTAALVQFKKQESVNDFLDLKAVLERADSAISILHPLSTILEG
GQTRAAKYDTYRDICSSSESKYLFADQAEAVCATSKNQLGENVDDNLISGVLDGVALASV
TEGDGIISDSKNQDIADVTCHDILDALHDGKALLVRRM |
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| NT seq |
2277 nt +upstreamnt +downstreamnt
atgggccatatggtaagcaggactccacccatccatcagaccaaatcaagcccaacccac
cgccgcgtgccttcaccgctccaccctccagcaacggcggcggccatgcagatgcagggc
cgcctccggcgcgtcctccgggcgccgccgcccagaatcctactctaccacgcgatctcc
tccccgccgaatggaggcaacggcggtggcggtggcggtggcggtggcggttgcggcagc
ggggtggcggtgaagcaggtgacgcgggggaacatggcggaggccctggagaagctgcgg
ggacgcgtgcgggaggccgcattcgtgggggtggacctggagatgagcggcgtcacgagc
gcgccctggagagacaccttcgagctcgaccgcgccgacgtgcgctacctcaaactccgc
gactccgcggagcggttcgccgccctgcagctcggcgtctgccccttccgatgggaccct
gccaaatccgccttcgttgcccaaccgcataacttctatatcttccctcgcaaggagctc
cctagtgattgttcatctcatgaatttctttgtcagacaacttcaattgacttcctagca
aagtaccagtttgatttcaacacatgcttccgtgaaggagtatcttatctatccagagca
caagaggaagaggcgctacagaaatttaatatgttgtatcatggtcaaacagctacatct
tccaccaattctgaagaggacagagacatacctttaaaaagtgcttctgatattcttttc
acagaaaggatgaaaatgaacttcaaggaatggcgtgatgtgatagtcagcaagccaatg
gttgacaaccatttgtcaggaaacattaaatgttgtgcaggacaattccagacagttttc
ttcaaaatgcgcccagctattatgcttaatggattctcatcgcatcaattgaagttgatt
caacaggttttgagaaaaaactttaaggatcttgtttttgtctgtacatctggtgaggat
gacacatctgaaaagaaagtagtttattcagacactgatgaggacagaatattattaatg
aaagatgttcaggaagatctactaaaaaacagggaagaaagagttaaatcagcaataggc
atccgccatgtcatcgaccttctttcatcagaaaggaaattgattgttggacatagttgt
ttcctagatattgcacaagtgtacagcaagtttgtaggtcctcttccatcatctatcaag
gaatttgcgttaagtttccacaaaattttcccacacattgcagataccaggcatcttatg
tctgtcaatcaagcagttcagaaactgatgaagcataaaagcaaatcactatcttcagct
ttctcattgttgtgccctgcatcttattcatctgttgagaagccatccagtcatcctcct
gtgacaattgaagttgaaggagatgaaacgacgtcttcttgcttcatttcaggtgccaag
catgaagctgggtatgatgcatacatgactggatgtatttttgcacagttgtgcgcttat
cttggcataaaatttgagcagttctcacctctagaaaacctagcaacgaacactaagctg
cataaacacatcaattttttgtcccctagctggaacagtgggacagtgattgatttgagc
actggcatggagagaccagaaccaggttatatgagaaggttccctgctgctgtgtatgat
aacataattgtcatctggggattcccgtctaaggttagaccaaaggaaattaaggattgc
atctgcaaagtatttggttcaggttcggttacaaccgtcttctccattgattccactgct
gcccttgtgcagttcaagaaacaagagtccgtaaacgatttcttggatttgaaggctgtt
ttggagagggcagatagtgctatctcaattctacaccccctgtcaacgatattggaagga
ggccaaacacgagctgcaaagtatgatacctacagagacatctgcagctcttctgaatca
aagtatctctttgctgatcaagctgaagcagtttgtgcaacgtcaaagaatcaactcgga
gaaaatgttgatgacaatcttatatctggtgttcttgatggagttgcactcgcctctgta
accgagggagatggaataatatcggattccaagaatcaagacattgctgatgttacatgt
cacgatatcttagatgctctacatgatggcaaagcattgttggtcagacgaatgtga |
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