Miscanthus floridulus: 136491120
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Entry
136491120 CDS
T10264
Name
(RefSeq) LOW QUALITY PROTEIN: endoribonuclease Dicer homolog 4-like
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
mflo Miscanthus floridulus
Brite
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
136491120
microRNA pathway
RISC loading complex
136491120
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GFIT
Other DBs
NCBI-GeneID:
136491120
NCBI-ProteinID:
XP_066343442
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Position
11:67734011..67764579
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AA seq
1627 aa
AA seq
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MGEGEDEAESSSFGAAAGEPKDPRTIARKYQLDLCKRAVDENIVVYLGTGCGKTHIAVLL
MYELGHLIRKPSREVCVFLAPTIPLVRQQAMVIADSTNFKVQRYYGSGKNSRDHQAWEKE
MREYEVLVMTPQILLHNLRHCFIKMDLIALLIFDECHHAQAQKRHPYAQIMKEFYNSADK
HPRVFGMTASPIIGKGGSNKLTYTKCINSLEELLNAKVCSVDNVELESVIASPKIEVYFY
GPVGHSNLITTYINELDGYKSQLLMCFEQSEYMLRESACNFKESQKKLKSLWRLHENLIF
CLQEVGLFGALQAARTFLSPSSGSLDGKGVDINDYVNKATSLLSRGILEGADADSFDLET
IEEPFFSKKFAVLIDVLSRYRLEENMKCIVFVKRIIVARVVAHILQNLKCLDFWKCEFLV
GCHSGLRNMSRDKMGSIIEKFSSGEVNLLVATSVGEEGLDIQTCCLVVRFDLPETVNSFI
QSRGRARMSKSKYVFLLERGNQSQEKLLDDYITGESIMDKEINLRTSNDMFDCLEENIYR
VNDTGASISTACSVSLLHRYCDNLPRDMFFVPSPSFFFVDDIDGIVCRLILPPNAAFRQV
NGQPCPSKDEAKRDACLKACIKLHELGALTDFLLPGQGSRKMKVSTTNISESNKDEDESF
REELHEMLIPAVLRPSRCKLDCSLKLHFYYIEFIPKPADRRYQMFGLFVINRLPEESEKL
DVELHLAHARIVKAGIKYLGKIEFNKEEMILAHNFQEMFLKVLLDRSEFTSSYILLGNDA
ALNMDSTFYLLLPIKQKFYGDNMIDWPTIKKCLSSPAFQDPMGLSLPDSCLPNESLKLLG
GTYKKADVIGSLVYTPHTDVFFFVDSILDGTNAKSELNGATYAEHFKERLHIKLSHPEQP
LLKAKQLFCLRNLLHNRQLESTESEGRELMEHFVELPPELCSLKITGFSKDMGSSLSLLP
SLMCRLENLLVAIELKDVMSSYFPEASQISASGILEALTTERCLERISLERLEVLGDAFL
KYVVGRHNFISYEGLDEGQLTRRRSDIVSNSNLYELSIRRNLQVYIRDQHFEPTQFFALG
RPCKVVCNPDREATLHPKNIDPDRRENCNLRCTKSHHWLHRKTIADVVESLVGAFIVECG
FKAAFAFLHWIGIKVDFENSALYRVLDASSSNLSLMNYMNISELEELIGYTFKHKGLLLQ
AFVHPSFNKHSGGCYQRMEFLGDAVLEYLMASYLYSAYPDLKPGQLTDLKSLAVNNNSFA
YVAVKKSIHKYLIKDSKSLTAAVNKFENYVNLSSSEKDLLEEPTCPKVLGDIVESCVGAV
LLDSGFNLNHVWKLMLMLLKPILSFCGMHIDPMRELREICQYNGFELRLPKPTEDNGEFH
VKVEVNIDGKMISCTAVNRNSKDARKVAAQEALSKLKNNGYRHKRKSLEEILRATTKKES
ELIGYDEEPINVEDDIQMKNLLINGEMEGNIFFQNKEVSLNGRSETSIQSTAGDNMVDKN
DVNNGRNNKSNVVVQNGCLLEGLTDKINQKEYHGDMVRKTARSFLYELCAANYWKPPEFE
LCKDEGPSHLRKFTCKVLIQITGTSATLLECYSDPKLQKKVAHEHAAEGALWYLKQLGYL
SKDDNRV
NT seq
4884 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagggcgaggacgaggctgagagctctagcttcggcgcggccgcgggcgaaccc
aaggatccgagaacgatcgctcgcaaatatcagctggatctttgcaagagggcagtcgat
gagaacatcgtggtgtaccttggaacaggatgtgggaagacacacattgccgtgttactc
atgtatgagcttggacacctcatccgcaaacccagccgcgaggtctgcgtcttcctcgca
ccgaccataccccttgtccgtcagcaagcaatggtgattgcggattccactaattttaaa
gttcaacgttactatggaagtggtaaaaactctagagatcaccaggcatgggagaaagag
atgcgagaatacgaggtccttgtaatgactccccaaatattattgcacaatttgcgtcat
tgtttcatcaagatggacttaattgcacttttgatatttgatgaatgccatcatgcacaa
gcacaaaaaaggcatccatatgcacaaattatgaaggaattctacaatagcgctgataaa
catcctcgtgtttttggcatgactgcttcaccgattattggaaaaggtggttctaacaag
cttacctacactaaatgtatcaacagtctcgaggaattacttaatgcaaaggtttgttca
gttgataatgtagaacttgaaagtgtgattgcttctcctaagattgaagtgtacttttat
ggcccagttggtcactctaacttgattacgacttacatcaatgagcttgatggctataag
tctcagcttttaatgtgctttgaacagtctgaatacatgttaagagagagtgcatgcaat
ttcaaggagtcacagaagaaactgaagtcgttatggaggttgcatgaaaatttgattttc
tgtttgcaagaagttggtctctttggagctctccaagctgcaaggacctttctctctccc
agtagcggtagtctagatggaaagggggttgacattaatgactatgtaaacaaagcaacg
tctcttctaagccgcggcatcttagaaggtgcagatgctgattcgtttgacctagagaca
atagaagaacctttcttctcaaaaaaatttgcagttcttattgacgttctatcgagatac
aggctggaggaaaacatgaaatgcattgtttttgtgaaaagaatcattgtcgcaagagta
gtagcacatattctccaaaatctgaagtgccttgatttttggaaatgtgagtttcttgtg
ggatgccactcgggattaaggaacatgtcaagggacaagatgggttctatcattgaaaag
ttctcttcgggtgaggtgaaccttttggtcgctactagtgtaggtgaggagggacttgac
attcagacttgctgccttgttgtgcggtttgatctccctgaaactgttaatagctttatc
cagtcaaggggacgtgcccggatgagtaaatctaaatatgtttttctcctggagagggga
aatcagtctcaggagaagttacttgatgattatattactggtgaaagcattatggataaa
gagattaacttgagaacatcaaatgatatgttcgattgccttgaggagaacatctatcga
gtcaatgatactggtgcttccattagcactgcttgcagtgtatctctattacatcgctac
tgtgataaccttcctagagatatgttttttgttccttccccatcattcttctttgtcgat
gacattgatggaatagtttgcagactaattcttccaccaaatgctgctttccgtcaagtg
aatggtcaaccctgtccatcgaaagatgaagctaagagagatgcatgcttgaaagcatgc
attaaacttcatgaactcggtgctttgacagattttcttctacctggccaaggctctaga
aagatgaaggtatcaacaacaaatatttcagaaagcaacaaagatgaggatgaaagtttt
agggaagagcttcatgagatgttaatccctgcagttctgagaccttcaagatgcaaacta
gattgctcattgaagttgcatttctattacatagaatttattcccaaaccagcagataga
cgatatcagatgtttggtctttttgtgatcaatcgccttccagaggaatctgaaaagttg
gatgttgaattgcatcttgctcatgcgaggattgtgaaagcaggaattaaatatttggga
aagattgagtttaacaaagaagagatgatactcgcacacaattttcaagaaatgtttttg
aaagttctcctggacagatccgagttcacttcatcttatattttgttggggaatgatgct
gcattgaacatggattcaacattttaccttttacttcccatcaagcagaaattctatggt
gataatatgattgattggccaacaataaagaagtgtttatcgtcacctgcatttcaagat
ccaatgggtttgtctctgcctgattcatgtttgccaaatgagtctttgaagcttcttggt
ggaacgtacaagaaagctgatgtcattggcagtttggtatatactccccacaccgacgtg
tttttcttcgttgactccattctggatggaacaaatgctaaaagtgagttgaacggtgca
acttatgcagaacattttaaggaaaggttacatatcaagctttcccatcctgagcagcca
cttttgaaagctaagcaactgttctgtctgcgtaatctgcttcataatcgacaacttgag
agcacagaatctgagggtcgtgaattgatggagcactttgtggagttacctccagagcta
tgctctttgaagataactgggttctcaaaagatatgggtagttctttgtccttgctacca
tcattaatgtgtcgcttggagaatttgttggtggctattgagttgaaggatgtcatgtca
tcctatttcccagaggcttctcaaattagtgcctcgggtatccttgaagcactgactact
gaaaggtgtttagagaggatctctttggagcgattagaagtcctaggtgatgctttcttg
aagtatgtagttgggcgccataactttatttcatatgaaggacttgatgaaggtcagttg
accaggagacgttctgatatagtgagtaattcgaatttatacgagttatcaattagaaga
aatttgcaggtatacatacgggatcaacactttgaacctactcagttctttgcactggga
agaccttgtaaagttgtttgcaatcctgacagagaagcgactttacacccgaagaatatc
gacccagatagacgtgaaaactgtaacttgaggtgtacaaaatcacatcattggttgcat
aggaagacaattgcagatgttgttgagtcacttgttggagcttttattgtcgagtgtgga
ttcaaagctgcatttgcattcctacattggattgggataaaagttgatttcgaaaattca
gctctctatagagtattagatgcaagctcctccaatttgtctctcatgaattacatgaac
atttctgagcttgaagaattgattggctacaccttcaagcacaagggtcttcttctccaa
gcatttgtacacccttcattcaataagcattctggaggatgctaccagaggatggagttt
cttggagatgctgttttggaatatttgatggcctcgtacctctactcagcttaccctgat
ctcaagcctggtcaactaacagatctgaaatcattagctgtgaataataattcatttgct
tatgtggccgttaagaaatctatccataaatatctcataaaggattctaaatctcttacg
gcagcggtaaataaatttgagaattatgttaatctttccagttcagagaaagacttgtta
gaagaaccaacatgtccaaaggttcttggtgatattgttgaatcttgtgttggtgcggtg
cttttagattccggcttcaacctgaaccatgtttggaagctaatgctaatgcttctaaag
ccaatattgagcttctgtggcatgcacattgatcctatgagagaactccgagaaatttgt
caatataatggttttgagttaagacttcccaaacctacggaggacaatggagagttccat
gtcaaagtagaagttaacatagatggcaagatgataagctgtactgcagtaaaccggaat
tcgaaagatgctagaaaggtagctgcacaagaagcgctttcaaaactgaagaataatgga
tacaggcataaaagaaagtcactggaggaaattttgcgtgctaccacgaaaaaagaatca
gaactgataggctatgatgaagaaccaatcaatgttgaggatgacatacaaatgaagaat
ctactgataaatggagaaatggaaggaaacatcttttttcaaaataaagaagtgtctttg
aacgggaggtctgaaacctccattcagagtacagcaggagataacatggttgacaagaat
gatgttaataatggaaggaacaataagtccaatgtggtcgtgcagaatggttgcctacta
gaggggctaactgataaaataaaccaaaaagagtatcatggtgatatggtacgcaaaaca
gcaaggtcattcctttatgaattatgtgctgcaaactattggaaacctcctgaatttgag
ttatgcaaagatgaaggaccaagccaccttcgaaagttcacttgtaaggtccttattcag
atcacgggaacttcagcgacccttttggagtgctatagcgatcctaagctacaaaagaaa
gtagcgcatgagcatgcggcagagggagctctgtggtatcttaagcaacttggataccta
tcaaaagatgataatcgtgtctag
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integrated database retrieval system
