Miscanthus floridulus: 136491499
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Entry
136491499 CDS
T10264
Name
(RefSeq) homeobox-leucine zipper protein ROC2-like
KO
K09338
homeobox-leucine zipper protein
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mflo03000
]
136491499
Transcription factors [BR:
mflo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
136491499
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
TUSC1
Cnn_1N
DivIC
DciA_cyano_C
HTH_Tnp_1
MRP-L20
Motif
Other DBs
NCBI-GeneID:
136491499
NCBI-ProteinID:
XP_066343924
LinkDB
All DBs
Position
11:complement(87528191..87534283)
Genome browser
AA seq
789 aa
AA seq
DB search
MMIPARHMPPMIVRNSAAAYGSSSALSLGQPNLLDSQLQQALQQQHLLDQIPATTAESGD
NMGHGGSGGGGRGSDPLGDEFESKSGSENVDGVSVDDQDPNQRPSKKKRYHRHTQHQIQE
MEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERQENSQLRAENEKL
RAENMRYKEALSSASCPNCGGPAALGEMSFDEHHLRVENARLREEIDRISAIAAKYVGKP
MVSFPVLSSPLAGARPSPLDIGGAVGGAAAYGAADIFDGGVAAGAAGDLLRGAVQSDADK
PMIVELAVTAMEELVRMAQLDEPLWNAPALDGSAETLNEEEYARMFPGGLGLKQYGFRSE
ASRDSSVVIMTHANLVEILMDVNQYVTVFSSIVSRAATLEVLSTGVAGNYNGALQVMSVE
FQVPSPLVPTRESYFVRYCKQNADGSWAVVDVSLDSLRPSSVLKCRRRPSGCLIQEMPNG
YSKVTWVEHVEVDDRSVHSIYKLLVNAGLAFGARRWVGTLDRQCERLASVMASNIPTSDI
GVITSTEGRKSMLKLAERMVTSFCGGVTASAAHQWTTLSGSGAEDVRVMTRKSVDDPGRP
PGIVLNAATSFWLPVPPKRVFDFLRDESSRSEWDILSNGGVVQEMAHIANGRDHGNCVSL
LRVNSTNSNQSNMLILQESCTDTSGSYVIYAPVDVVAMNVVLNGGDPDYVALLPSGFAIL
PDGPAGSNMQGDGGVGSGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIACTVERIKAA
VSGESNPQQ
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgatgatcccggcgaggcacatgccgccgatgatcgtccggaacagcgccgcggcgtac
gggtcctcgtcggcactgtcgctcggccagccgaacctgctggacagccagctccagcag
gcgctgcagcagcagcacctgctggatcagatccccgcgacgacggcggagagcggcgac
aacatggggcacggtggcagcggcggcggcggccgggggtccgacccgctgggcgacgag
ttcgagagcaagtccggcagcgagaacgtggacggcgtctccgtggacgaccaggacccc
aaccagcggcccagcaagaagaagcgctaccaccgccacacccagcatcagatccaggag
atggaagctttcttcaaggaatgcccgcacccggacgacaagcagcgcaaagagctgagc
cgcgagctggggctggagcccctccaggtcaagttctggttccagaacaagcgcacgcaa
atgaagaaccagcacgagcggcaggagaactcgcagctgagggcggagaacgagaagctg
cgcgccgagaacatgcggtacaaggaggccctcagcagcgcgtcctgccccaactgcggc
ggccctgccgcgctcggcgagatgtccttcgacgagcaccacctccgcgtcgagaatgcg
cgcctccgggaggagatcgacaggatctccgccatcgccgccaagtacgtgggcaagccc
atggtgtccttccccgtgctgtccagcccgctcgccggggcacgtccgtcgccgctggac
atcggcggcgccgtggggggtgccgctgcgtatggcgctgccgatatcttcgatggcggt
gtcgctgctggtgcggccggggacctgctgaggggcgccgtgcagtcggacgccgacaag
cctatgattgttgagctggccgtcacggccatggaggagctggtccggatggcgcagctg
gacgagccgctgtggaacgcgccagccctcgatggatctgctgagacgctgaacgaggag
gagtacgcacgcatgttccctggcgggctcggcctaaagcagtatgggttcaggtcggag
gcatcacgcgacagctccgtcgtcatcatgacccatgccaacctcgtcgagatcctcatg
gacgtgaatcagtatgtgacggtgttctcgagcattgtgtcgagagccgcgacgctggag
gtgctatccactggcgtggctgggaactacaatggtgcattgcaagtgatgtcagttgag
tttcaggtgccttccccactggtgccgaccagggaaagctatttcgtgagatactgcaag
cagaacgctgatggatcatgggccgttgtcgacgtctcactggacagcctgcgccccagc
tcagtcctcaagtgccggcgccggccgtcaggatgtctgatccaggaaatgcccaatggc
tactcaaaggtgacctgggtggagcacgtcgaggtggacgacaggtcggtgcacagcatc
tacaaactgctggtgaacgctgggctcgccttcggtgcacgccggtgggttggaacgctg
gatcgccagtgcgaacgccttgccagtgtcatggctagcaacattccaaccagtgacatc
ggtgtgatcactagcacggaggggcggaagagtatgctgaagctggctgagaggatggtg
acgagcttctgtggtggagtgacggcctcggctgcacaccagtggacaacgctgtcaggc
agtggtgctgaggacgtccgtgtcatgaccaggaagagcgtcgacgaccctggcaggcca
ccgggcatagtcctcaatgctgccacctctttctggctcccagtcccgcccaagcgtgtc
ttcgacttccttcgtgatgaaagctctcgcagcgagtgggacatcctctccaatggcggc
gtcgttcaagaaatggctcacattgccaatggccgtgaccatggcaactgcgtctcgctt
cttcgtgtcaatagcacgaactcgaaccaaagcaacatgctgatcctgcaagagagctgc
actgacacatcaggctcgtacgtcatctatgcgccagtggacgtggtcgccatgaacgtt
gtcctcaatggtggtgaccctgactatgtggcgctcctaccctctggctttgccatcctg
cctgacggcccggcaggcagcaacatgcaaggcgatggtggcgtcggctcaggtggatca
ctcctgacggtggcgttccagatactggtcgactccgtccccacagccaagctctccctg
gggtcggtggcgacagtgaacagcctcatcgcctgcaccgtggagcgcatcaaggcggcg
gtctccggcgagagcaatccccagcagtag
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