Miscanthus floridulus: 136492156
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Entry
136492156 CDS
T10264
Name
(RefSeq) replication factor C subunit 5-like
KO
K10756
replication factor C subunit 3/5
Organism
mflo Miscanthus floridulus
Pathway
mflo03030
DNA replication
mflo03410
Base excision repair
mflo03420
Nucleotide excision repair
mflo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
136492156
03410 Base excision repair
136492156
03420 Nucleotide excision repair
136492156
03430 Mismatch repair
136492156
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mflo03032
]
136492156
03036 Chromosome and associated proteins [BR:
mflo03036
]
136492156
03400 DNA repair and recombination proteins [BR:
mflo03400
]
136492156
DNA replication proteins [BR:
mflo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
136492156
DNA Replication Termination Factors
ELG1-RFC complex
136492156
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
136492156
DNA repair and recombination proteins [BR:
mflo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
136492156
Check point factors
HRAD17(Rad24)-RFC complex
136492156
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCF1-5-like_lid
RFC_C
RuvB_N
HAUS5
Motif
Other DBs
NCBI-GeneID:
136492156
NCBI-ProteinID:
XP_066344372
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All DBs
Position
1:complement(120371523..120375425)
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AA seq
614 aa
AA seq
DB search
METSSPSLASSPGATLSAVIAEDRRREARRRRQGAFGQGGLLPYLVPACGRPAGQIGGRP
LHSELMIKLHRWGATFLPKGGGAAVAREHEARRRAPSPPPRPRPSMEPAAAAAAEAEAVP
RHEAPAVSVPARRPLREREEPAAGSKAIAEADMSAGEGAGSSDRATPFATVAGGGGGTWL
RVSPKTTVRSPSLQTDTSNESPRSLADSPALAAVADDKYMWADKYRPNLLNEFICNKTVA
DELYQLLVAHQCSHFIFEGPPAVGKRSMVLALIRDAFGPHDLRLKIEEQTKRFELKGEVR
KHIDVRVKTSEHHVEVSLADLHGYEKYVITTLLNESIPSPNSACDHTNCRVIVIHDADKL
SSDLQHYIGWFLGRYAGCNKIIFCGSDASNLEGIKHLCKVVTLQPPSFDEIIKVLEYIAT
QETIDLPRDLARRITVGARNNLRQAIRSFEATWKAYYPFIDGQVILTGWEEEISNVARNI
MVEPSSKQLFAIRGKIRKLIEHDVSPHFIFSYLVAELKRDKDEDFQHSVDELVLDLDHVT
NFKDCKLLKGQCKGNKSPEADLKTKNMNIEDFATEVHDHGETMQCFIKIEEFTVRFLSFY
RTIVAKNSNRGSAQ
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggaaacctcgtcgccttcactcgcctcgtcgccgggagccacgctctccgccgtgatc
gctgaggaccgccgccgggaggcccgccgccgccgccagggggccttcggacagggcggt
ctcctcccgtacctcgtcccggcttgcgggcgtccggccggccagataggcggcaggccg
ctgcactctgagctcatgataaaactgcaccgctggggcgccaccttcctgcccaagggc
ggcggcgccgccgtcgcgcgcgaacacgaggcgcggcgccgcgcgccaagcccgccacca
cggcctagaccgtcgatggaaccggctgcagcggcggcggcggaggcggaggcggtgccg
cgccacgaggcgcccgccgtgagtgtccccgcgaggaggcctttgagggagagagaggag
ccggcggcgggatccaaagccattgccgaagcggacatgtccgccggcgagggcgcgggg
agcagcgaccgggcgacgccgttcgctaccgtcgcgggaggaggtgggggaacctggctc
agagtttcgcccaagacgacagtgagatctccgtcactgcagacggacacgagcaacgag
tcccctcggtccctcgccgactcccccgcattggccgcagtggccgacgacaagtacatg
tgggcggacaagtaccggcccaatctcctcaacgagttcatctgcaacaagaccgtcgcc
gacgagctctaccagctgcttgttgcacaccagtgcagccatttcatctttgaaggtccg
ccggcggttgggaagagaagcatggtactggcacttataagggatgcttttggccctcat
gatctcagactcaagatagaggaacagacaaagagatttgagctgaagggagaagttaga
aagcacatcgatgtcagagtgaagacctccgagcatcatgtggaggtgagcttggctgat
ttacatggctatgagaagtacgtcataactactttgttgaatgaatccatcccatcacca
aactcagcttgtgaccatactaactgcagagtgattgttatccatgatgctgacaagctc
tcgtccgatcttcaacattatatcggttggtttttggggaggtatgccgggtgcaacaaa
atcattttctgcggttctgatgcttctaatcttgaaggcatcaaacatctctgtaaggtt
gtgactcttcagccaccttcctttgacgagataataaaggttctggagtacattgcaacg
caagagaccattgatttgcctcgtgatcttgctaggagaattacagttggcgcaagaaat
aatctccgacaagcaatacgctcttttgaagctacttggaaggcatactacccgttcata
gacggtcaagttattttgacaggatgggaagaggaaatctctaatgtggccagaaatatc
atggtggagccaagttcaaagcaactgtttgctatccggggaaagatcagaaaattgatt
gaacatgatgtgtcacctcatttcattttctcttacctggtagctgaactgaaaagggac
aaggatgaagacttccaacacagtgttgatgaactggtcttggacttggaccatgtaacc
aattttaaagactgcaagcttctaaaagggcagtgcaaagggaacaaatcaccggaggca
gatttgaaaacgaaaaatatgaacatagaagattttgccacggaggttcatgaccatggt
gaaaccatgcaatgcttcataaagattgaagaattcaccgtgaggttcctgagcttctac
agaactatagtggcaaagaactcgaatagaggcagtgctcaatga
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