Miscanthus floridulus: 136492314
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Entry
136492314 CDS
T10264
Name
(RefSeq) replication factor C subunit 5-like
KO
K10756
replication factor C subunit 3/5
Organism
mflo Miscanthus floridulus
Pathway
mflo03030
DNA replication
mflo03410
Base excision repair
mflo03420
Nucleotide excision repair
mflo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
136492314
03410 Base excision repair
136492314
03420 Nucleotide excision repair
136492314
03430 Mismatch repair
136492314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mflo03032
]
136492314
03036 Chromosome and associated proteins [BR:
mflo03036
]
136492314
03400 DNA repair and recombination proteins [BR:
mflo03400
]
136492314
DNA replication proteins [BR:
mflo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
136492314
DNA Replication Termination Factors
ELG1-RFC complex
136492314
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
136492314
DNA repair and recombination proteins [BR:
mflo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
136492314
Check point factors
HRAD17(Rad24)-RFC complex
136492314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCF1-5-like_lid
RFC_C
RuvB_N
Motif
Other DBs
NCBI-GeneID:
136492314
NCBI-ProteinID:
XP_066344472
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Position
1:121834918..121838583
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AA seq
607 aa
AA seq
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METSSPSLASSPGATLSAVIAEDRRREARRRRQGTFGQGGLLPYLVPACGRPAGKIGGRP
LHSELMIKLHRWGATFLPKGGGAAVARTPSPPPRPRPSMEPAAAAAAEAEAEVVPRYEAP
AVSVPARRPLREREEPALGSKAIAEADMSAGEGAGSSDRATPFATVAGGGGGTWLRVSPK
TTVRSPSLQTDTSNESPRSLADSPALAAVADDKYMWADKYRPNLLNEFICNKTVADELYQ
LLVAHQCSHFIFEGPPAVGKRSMVLALIRDAFGPHDLKIEEQTKRFELKGEVRKHIDVRV
KTSEHHVEVSLADLHGYEKYVITTLLNESIPSPNSACDHTNCRVIVIHDADKLSSDLQHY
IGWFLGRYAGCNKIIFCGSDASNLEGIKHLCKVVTLQPPSFDEIIKVLEYIATQETIDLP
RDLARRITVGARNNLRQAIRSFEATWKAYYPFIDGQVILTGWEEEISNVARNIMVEPSSK
QLFAIRGKIRKLIEHDVLPHFIFSHLVAELKRDKDEDFQHSVDELALDLNHVNNFKDCKL
LKGQRKGNKSPEADLKTKNMNIEDFATEVHDHGDTIQCFIEIEEFTVRFLSFYRSIVAKN
SNRGSAQ
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggaaacctcgtcgccttcactcgcctcgtcgccgggagccacgctctccgccgtgatc
gctgaggaccgccgccgggaggcccgccgccgccgccaggggaccttcggacagggcggt
ctcctcccgtacctcgtcccggcttgcgggcgtccggccggcaagataggcggcaggccg
ctgcactctgagctcatgataaaactgcaccgctggggcgccaccttcctgcccaaggga
ggcggcgccgccgttgcgcgcacgccaagcccgcctccacggcctagaccgtcgatggaa
ccggctgcagcggcggcggcggaggcggaggcggaggtggtgccgcgctacgaggcaccc
gccgtgagtgtccccgcgaggaggcctttgagggagagagaggagccagcgctgggatcc
aaagccattgccgaagcggacatgtccgccggcgagggcgcggggagcagcgaccgggcg
acgccgttcgctaccgtcgcgggaggaggtgggggaacctggctcagagtttcgcccaag
acgacagtgaggtctccgtcactgcagacggacacgagcaacgagtcccctcggtccctc
gccgactcccccgcattggccgcagtggccgacgacaagtacatgtgggcggacaagtac
cggcccaatctcctcaacgagttcatctgcaacaagaccgtcgccgacgagctctaccaa
ctgcttgttgcacaccagtgcagccatttcatctttgaaggtccgccggcggttgggaag
agaagcatggtactggcacttataagggatgcttttggccctcatgatctcaagatagag
gaacagacaaagagatttgagctgaagggagaagttagaaagcacatcgatgtcagagtg
aagacctccgagcatcatgtggaggtgagcttggctgatttacatggctatgagaagtac
gtcataactactttgttgaatgaatccatcccatcaccaaactcagcttgtgaccatact
aactgcagagtgattgttatccatgacgctgataagctctcgtccgatcttcaacattat
atcggttggtttttggggaggtatgccgggtgcaacaaaatcattttctgcggttctgat
gcttctaatcttgaaggcatcaaacatctctgtaaggttgtgactcttcagccaccttcc
tttgacgagataataaaggttctggagtacattgcaacgcaagagaccattgatttgcct
cgtgatcttgctaggagaattacagttggcgcaagaaataatctccgacaggcaatacgc
tcttttgaagctacttggaaggcatactacccgttcatagacggtcaagttattttgaca
ggatgggaagaggaaatctctaatgtggccagaaatatcatggtggagccaagttcaaag
caactgtttgctatccggggaaagatcagaaaattgattgaacatgatgtgttacctcat
ttcattttctctcacctggtagctgaactgaaaagggacaaggatgaagacttccaacac
agtgttgatgaactggccttggacttgaaccatgtaaacaattttaaagactgcaagctt
ctaaaagggcagcgcaaagggaacaaatcaccggaggcagatttgaaaacgaaaaatatg
aacatagaagattttgccacggaggttcatgaccatggtgataccatccaatgcttcata
gagattgaagaattcaccgtgaggttcctgagcttctacagatctatagtggcaaagaac
tcgaatagaggcagtgctcaatga
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