Miscanthus floridulus: 136492601
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Entry
136492601 CDS
T10264
Name
(RefSeq) small RNA degrading nuclease 1-like isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
mflo Miscanthus floridulus
Pathway
mflo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
136492601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mflo03009
]
136492601
Ribosome biogenesis [BR:
mflo03009
]
Eukaryotic type
Pre-60S particles
RNases
136492601
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
PhiKZ_gp86
Trypan_PARP
Motif
Other DBs
NCBI-GeneID:
136492601
NCBI-ProteinID:
XP_066344678
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All DBs
Position
11:complement(91721118..91724918)
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AA seq
500 aa
AA seq
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MAKRLAAAEKEVLVEVVRFTQKNGLRGCDGGWKDFLARNDRKFGASVSDPRKRTRDVLLA
FLQTFSKDFQKYFGKLVKRHKERSAVQQYMTDFPDEVSPEQKLVQLTAEHPEYRKHYCFP
SYQEGWKVLRIGEVSSLMSSSAMLAIDCEMVLCNDGTEAVVRVCVVDDKLKAKLDILVNP
LKTIADYRTHITGVSKKDLEGVTSSLVDVQKSLKRMLSKGNILIGHSLHRDLCALKIDYS
QVIDTAYIFKYANLPTTASPSLNSLCKATLGYSVREEGEPHNCLKDAEAAMNLVLAKLKN
GFNDPIEIAASSVIESDVAKLLAHRIPVYLPCQELCKIFSGNPNIDDKIDSRIRGEFYST
CISFNDLDEVEKAFEELDGQKTKDSGGRLQKHVLLKRDNGDVVSFYVRKMVYDSWPKQLE
VPKKRPEPAEDPEPNKEHAEEVQQKKKRSNFVRDTEDPEPKKRPEPTKDPEPKKDHAEGV
WQKKKRSKKHTNKENVSVVE
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcggctcgccgccgccgagaaagaggtgctcgtcgaggtggtgcggttcacg
cagaagaacggcctgagaggctgtgacggcgggtggaaggatttcctggcccggaacgac
aggaagtttggcgcgtcggtgagcgaccccaggaagcgcaccagggatgtgctgctcgcc
ttcctgcagaccttctccaaggatttccagaagtacttcggtaaattggtgaagcgtcat
aaggaaagaagtgctgttcagcagtatatgactgatttccccgacgaagtttctcccgag
cagaaacttgttcagctgacggcagagcacccggagtacagaaaacactattgcttccca
tcataccaggaggggtggaaagtattgcgaataggagaagtctctagtttaatgagctca
agtgctatgttggcaattgactgtgagatggtcctttgcaatgatggcacagaggctgtg
gtcagagtatgcgttgtagatgacaagctcaaggctaagctggacatacttgtaaacccc
ttgaagactatagctgactataggacacacatcactggtgtatcaaagaaggatttagaa
ggagtcacatcatcattagttgatgttcagaaatcgctgaagagaatgttatccaaagga
aatattttgattggccatagcttacatagagatttatgcgccttaaagattgattactct
caagttattgatacagcatacatatttaagtatgcaaatttacctactactgcatcacct
tccttaaacagtttgtgcaaggctactttggggtattctgttcgagaagaaggagaacca
cataattgcttaaaggatgcagaagctgcgatgaatctagttcttgcaaagcttaagaat
gggtttaatgaccccattgaaattgctgcaagtagtgtaattgaatctgatgtggcaaag
ttgcttgctcatagaattccagtgtacctgccttgccaagagctgtgcaaaattttctct
gggaaccccaatattgatgacaagattgattcgagaatacgaggtgaattttattccacg
tgtatttcattcaatgacctagatgaggtagagaaggcatttgaagagctggatggccaa
aagactaaggactcaggtgggagacttcaaaagcatgtactgctgaagcgtgacaatgga
gatgtcgtgagcttctatgttcggaagatggtatatgattcctggcccaaacagctcgaa
gttccaaagaagagaccagagcctgctgaggatccagagccaaacaaagagcatgctgag
gaagttcagcaaaaaaagaagagaagtaacttcgtgagagatactgaggatccagagcca
aagaagagaccagagcctactaaggatccagagccaaagaaagatcatgccgagggggtt
tggcaaaagaagaagagaagtaaaaaacacacaaacaaggaaaatgtgtcggtggtggaa
tga
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