KEGG   Miscanthus floridulus: 136492838
Entry
136492838         CDS       T10264                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4-like
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
mflo  Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:mflo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:mflo04812]
    136492838
Cytoskeleton proteins [BR:mflo04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     136492838
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_THOC3 Katanin_con80 WD40_Prp19 WD40_Gbeta WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_WDR36-Utp21_1st WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_SCAP Beta-prop_TEP1_C Beta-prop_DCAF4 Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_EIPR1 NBCH_WD40 WDR90_beta-prop_4th Beta-prop_Aladin Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_WDR41 eIF2A Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_VPS8 Beta-prop_WDR19_1st Beta-prop_IP5PC_F Beta-prop_ACSF4 Beta-prop_RIG_1st PAN2_N WDR54
Other DBs
NCBI-GeneID: 136492838
NCBI-ProteinID: XP_066344986
LinkDB
Position
11:100105449..100113986
AA seq 924 aa
MTTNTKRAYKLQEFVAHSSNVNCLKIGRKTSRVLVTGGEDHKVNLWAIGKPNSILSLSGH
TSAVESVGFDSTEVFVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCMSVDFHPFGEFFAS
GSLDTNLKIWDIRRKNCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNIVKLWDLTAGKLL
HEFKCHEGQIQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSTGPETTGVRSMTFNPD
GRSLLCGLHESLKVFSWEPIRCHDTVDVGWSRLADLNVHEGKLLGCSFNQSCVGIWVVDL
TRLDPYATGTSTKLNGHSELKTVSSGTMPLQNDSGSRANIGRPSVLQNSENNLKTSSGRL
SASQNSDSAPKETKSAPSSGLVPSTPQRAGVSSNNRSVGNSAFQSGGTTLKRSSLRSNSA
SNVHNFSKADVVPVIVPRTSSGGELATDSRSDAADVPPVLPKVTQRVDPATDSRKESNDV
EPVIPRASSRMETASDSAPISTSKSGRRLESAPDSKKESADTAPVVVSNPRANVRMEMAS
DSAPALSKSNRKLDSGTDSKKESADAVPVIVPRTNSRMKMISDSRREPSAGRVSPFRIQS
RYAELRKLTHAKTDSNKVDSGSKITETDDFNCQIFLPCTNGVFQTISSEESREDVKCGPV
DRMGFSNSSEPNASVRSENYVSRIRKPRDNCYIEVSRAGQARSSVSNWEGRDQSPSHEEP
TTSSSSLAPTGRPYSSRGSNQKASETPIIASDEDVLSLIMEQHDLFLSSTKSRLTKLQII
HQMWERNDVRGVLSAMERMGDHAVCADMAIVLMERSEIITLDLCTSILPVVTDLLESKID
RHLCVALELLVKLVRTFGPMIHSTVSSGPCVGVDLEAEQRRERCNLCFIELEKAKNKLPS
LTRRKGAVANAAQELALVFQEIMS
NT seq 2775 nt   +upstreamnt  +downstreamnt
atgacgaccaacaccaagcgcgcctacaagctccaggagtttgtggcacactcttccaat
gttaactgcctcaagattgggaggaagacctcgcgggttcttgtcacaggaggagaggat
cataaggtcaatctttgggctattgggaagcccaattcaatattgagtttatcaggtcac
acaagtgctgtggagtctgttggttttgattccacggaagtgtttgtggctgcaggagca
gccagtggaacaataaaactatgggatttggaggaagcaaagattgtccgcactcttact
ggacatagatcaaactgtatgtcagttgatttccatccgtttggggaattctttgcctct
gggtcattggacactaatctgaagatatgggatataagaagaaagaattgcatccataca
tacaaaggtcacacacgaggggtgaatgctattagattcacacccgatgggcgctgggtt
gtgtctggtggcgaagataatatagtaaagctctgggatctgaccgctggaaagttatta
catgaattcaagtgtcatgagggtcagatccagtgcatagatttccacccccatgagttc
cttctggcaacaggttcagctgataaaactgtcaagttctgggatttggagacatttgag
ttgattggatctacaggacctgagacaacaggtgtacggtccatgacattcaatcctgat
ggaagatctctgttgtgtgggttgcacgaaagcttaaaggttttctcttgggaaccaata
agatgccatgatactgttgatgtgggatggtctagacttgctgatttgaatgtccacgag
ggaaaacttcttggttgttctttcaatcaaagttgtgttggaatatgggttgttgatctg
acgcgtcttgatccatatgcaacgggtacttcaacaaaactaaatggtcattctgaattg
aagactgtgtctagcggcactatgcctttacaaaatgatagtggttcaagggctaacata
gggcggccatcagtcttgcaaaattcagagaataacttgaaaacttcttcaggaagattg
tcggcttcccagaactctgattctgcacccaaagagactaaatcagcaccctcaagcggg
ttggtcccaagcacaccacaaagggctggagttagctccaataatagatctgttggaaat
tcagcttttcaatctggtggtaccaccttgaagagaagttcgttgcggagtaacagtgcc
tctaatgttcacaatttcagtaaagctgatgtagtgcctgtcattgttcccagaactagc
tcaggaggggagttggctactgattctagaagcgatgctgctgatgtgccacctgttctt
cctaaggtaacccaaagggttgatcctgctaccgattctagaaaagaaagcaatgatgtg
gaacctgttattcctagagcaagctcaagaatggaaacagcctctgattcagcacccatt
tctacttccaagtcaggcagaaggttggagtctgcccctgattcaaaaaaagaaagtgct
gatacagcacctgttgttgtttccaatcccagggcaaatgtaagaatggagatggcctct
gattctgctcccgctctttcaaagtcaaacagaaagctagattctggtactgattcaaag
aaagaaagtgcggatgcagtacctgtcattgttcccagaacaaattctagaatgaaaatg
atttctgattctaggagagaaccttctgctggaagagtatcaccattcagaatccagtca
agatatgctgagctacggaagctaacccatgccaaaactgattcaaacaaagttgatagc
ggaagtaaaattactgaaacagatgacttcaattgccaaatatttcttccctgtacaaat
ggtgtttttcaaacaataagttctgaagaatctcgtgaagatgtaaagtgtggtccagtt
gacaggatgggattttcgaattcatcagaaccaaatgcaagtgtccgcagtgagaattat
gtttctagaatacgcaaaccaagagataactgctatatcgaagtttcaagagcagggcaa
gcaaggtcaagtgtctctaattgggaagggagggatcagtcccctagtcacgaagaaccg
acaacaagcagttcttcgctggctcctacaggccgtccatattcatctagaggaagcaat
caaaaagcttctgaaactccaatcatagctagcgatgaagatgttctatctcttatcatg
gagcaacatgatctatttctaagctcaacaaagtctcggctgacaaaattgcagattatt
catcaaatgtgggaaagaaatgacgtcaggggtgtgctctctgcgatggaaaggatgggt
gatcatgctgtctgtgctgatatggctattgttctgatggagagaagtgaaataatcaca
ctagatttatgtacctctatcctgcctgttgtcactgatcttctggagagtaaaattgac
agacacttatgcgttgcattggaattattggtgaagcttgtaaggacttttggtccaatg
atacattcaacagtatcatcaggtccttgtgttggcgtagaccttgaggcagagcaaagg
agggagcgctgcaacttatgcttcattgaattggagaaggcaaaaaataagcttccgtct
ctaacaagaagaaaaggggcggttgcaaatgctgcacaagagcttgctcttgtcttccag
gaaatcatgagttga

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