Miscanthus floridulus: 136493416
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Entry
136493416 CDS
T10264
Name
(RefSeq) autophagy-related protein 13a-like
KO
K08331
autophagy-related protein 13
Organism
mflo Miscanthus floridulus
Pathway
mflo04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
136493416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mflo04131
]
136493416
03029 Mitochondrial biogenesis [BR:
mflo03029
]
136493416
Membrane trafficking [BR:
mflo04131
]
Autophagy
Autophagosome formation proteins
ULK complex
136493416
Atg1 complex
136493416
Mitochondrial biogenesis [BR:
mflo03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
136493416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Lipoprotein_7
Motif
Other DBs
NCBI-GeneID:
136493416
NCBI-ProteinID:
XP_066345601
LinkDB
All DBs
Position
11:complement(74436895..74441575)
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AA seq
511 aa
AA seq
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MSGMSDSAGGVRAGTELMVEQFHLKVLHAVLAVRTPRPLAAAAAASASFRPRDRWFHLPL
HDPPPPPEAADRLDELAPGEPLVVDVFLCPAGGVGARGEVVERWTVACEPWPDAAGGEEV
AVNRAYKHCFTLLRSVYAALRVLPAYRIFRLLCANPSYNYEMGHRVDTFAELFSRTQEAA
MRSQRFVPVETQLGRLVVSVQYLPSLAAFNLEITSLSPSVIIPDYVGSPAAEPMRAFPAS
LTEAAGSGFPPSYQQQRPHSWASPAFWPHTPAHQARFSPPPVFYASPTPSPPHFPPRLMR
WESAPMPIPQVSERRSPAHRQNMLPPPSPRRGDMGAAGALESPSESGRLIGRMEELRLAD
PYATSSPRHKGKDNKDESGRFSALSSCDSPRQDDLDDVDYHFDVDDVDTPVSHPRSADGK
ETGDQVVSSSHKSQDAQVGSLVNLLRNARPLRNPINSSQTSRAESSEVASASSVTSRRTS
DALEELQSFKEIRERLLSRSSAKHQEPPGKP
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgtccgggatgtccgactccgctgggggcgtgcgcgcgggcacggagctgatggtggag
cagttccacctcaaggtgctccacgccgtcctcgcagtgcgcacgccgcgcccgctcgcc
gccgccgccgccgcctcggcgtcgttcaggccgagggacaggtggttccatctcccgctc
cacgacccgccgccgccgcccgaggcggccgaccgcctggacgagctggcccccggggag
ccgctggtggtggacgtcttcctgtgccccgccggtggtgtgggagcccgaggggaggtg
gtcgagaggtggactgtggcgtgcgagccctggccggacgccgcgggcggcgaggaggtt
gccgtgaaccgggcgtacaagcactgcttcacgctgctcaggtccgtctacgccgccctc
cgcgtcctcccggcgtaccgcatcttccgcctcctctgcgccaatccctcctacaactac
gagatgggccaccgcgttgacaccttcgccgagctcttctcgcgcacccaggaggccgcc
atgcgttcccaacgctttgttcccgtcgaaacccagctcggtcgcctcgtcgtttccgtc
cagtacctccccagcctcgccgccttcaacctcgagatcacctccctttcgccctccgtg
ataatcccagactacgtcggcagcccagccgctgagcccatgcgcgccttcccagcctcc
cttacagaagccgcgggctccggcttcccaccgtcctatcagcagcagcgcccacacagc
tgggcttcgcctgcgttctggccgcacacgccggcacaccaggccaggttctcgccgcct
ccagtgttttacgcgtcaccgacgccatcgcctccccactttccaccacgtctcatgagg
tgggagtctgcgccaatgcccataccacaggtgagcgagaggaggagccccgcacaccgc
cagaatatgctgccaccgccttcgccgagaagaggagacatgggggcagcaggtgctcta
gagtctccatctgagagtggccggttgattgggaggatggaggaacttcggttagctgat
ccatacgcgacctcatcacccagacataagggcaaggacaataaagatgaatctggcaga
ttctctgcactctcctcatgtgattcaccacggcaagatgatttggatgatgtggattac
cattttgacgttgatgatgttgacactccagtctcccatcctcggagcgctgatgggaag
gaaacaggtgatcaggttgtttcatcatcccataaatctcaagacgcacaagtcggttct
ctagtcaacctgctgagaaacgcccgcccgctgcgaaatcctatcaattcatcacaaaca
tcaagggctgagtccagcgaagtagcctcagcaagctcggtcacgtcccgtaggacatct
gacgcgcttgaggagctccagtccttcaaagagataagggagcgactgctgtcccggagc
agtgcaaaacatcaagagccaccgggaaagccatag
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