Miscanthus floridulus: 136493491
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Entry
136493491 CDS
T10264
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
mflo Miscanthus floridulus
Pathway
mflo03030
DNA replication
mflo03410
Base excision repair
mflo03420
Nucleotide excision repair
mflo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
136493491
03410 Base excision repair
136493491
03420 Nucleotide excision repair
136493491
03430 Mismatch repair
136493491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mflo03032
]
136493491
03036 Chromosome and associated proteins [BR:
mflo03036
]
136493491
03400 DNA repair and recombination proteins [BR:
mflo03400
]
136493491
DNA replication proteins [BR:
mflo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
136493491
DNA Replication Termination Factors
ELG1-RFC complex
136493491
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
136493491
DNA repair and recombination proteins [BR:
mflo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
136493491
Check point factors
HRAD17(Rad24)-RFC complex
136493491
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
nSTAND_NTPase5
AAA_22
Mg_chelatase
Rad17
AAA_16
AAA_lid_RFC1
Viral_helicase1
RCF1-5-like_lid
AAA_5
nSTAND3
RuvB_N
AAA_11
AAA_28
AAA_19
AAA_assoc_2
AAA_25
MeaB
AAA_30
DNAX_ATPase_lid
RNA_helicase
AAA_3
ABC_tran
IstB_IS21
AAA_24
SLFN-g3_helicase
NPHP3_N
DNA_pol3_gamma3
NTPase_1
bpMoxR
KTI12
AAA_18
DO-GTPase1
DUF6120
DNA_pol3_delta_C
Motif
Other DBs
NCBI-GeneID:
136493491
NCBI-ProteinID:
XP_066345680
LinkDB
All DBs
Position
11:78086179..78104791
Genome browser
AA seq
331 aa
AA seq
DB search
MAAASSSADAYDIPWVEKYRPTRVADVVGNSDAVARLEVIARDGNMPNLILSGPPGTGKT
TSILALAHELLGPSYREAVLELNASDDRGLDVVRNKIKMFAQKKVTLQPGRHKIVILDEA
DSMTSGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRLM
IVVEAEKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQENVFKVCDQPHPLHV
KNMVKMVLDGKFDEACSALKQLYDLGYSPTDIITTLFRVVKNYDMAEYLKLEMLKETGFA
HMRICDGVGSFLQLSGLLAKFALVRETAKAP
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcctcctcctccgccgacgcctacgacatcccgtgggtggagaagtaccgc
cccacccgcgtcgctgacgtcgtcggcaactccgatgccgtcgcccgcctggaggtcatt
gcccgcgatggcaacatgcccaacctcatcctctccgggcctccggggaccgggaagacg
acgagcatcctggcgctggcgcacgagcttctggggcccagctaccgcgaggccgtgcta
gagctcaatgcctcagatgacaggggtttggacgtggtgcggaacaagatcaagatgttt
gcccagaagaaggtcaccctgcagccagggcggcacaaaatcgtgatcttggatgaggct
gacagcatgacatcaggagcacagcaagctttgcgaaggacaatggagatctattcaaac
acaactagatttgcactagcatgcaacacctcatcaaagataattgaacccattcaaagc
cgatgtgctattgtcaggttctcaaggctctctgaccaggagatccttggccgcctcatg
attgttgtggaagctgagaaggttccttatgtgccagaggggctagaagctatcatattt
actgctgatggtgacatgagacaagctttgaacaacctgcaagctacatttagtgggttc
cgctttgtcaatcaagaaaatgtgttcaaggtgtgcgatcaaccacatcccttacatgtc
aagaacatggtaaaaatggtgcttgatggaaagtttgatgaggcctgctctgcactgaag
caactttatgatttgggatactctcctactgacattatcactactctcttccgtgttgtg
aagaattatgacatggctgaatatctgaagctggaaatgctgaaggaaactggatttgca
cacatgagaatctgtgatggtgttggatcatttcttcagctttctggtctacttgccaag
tttgcgctcgtgagggaaactgcaaaagcaccatga
DBGET
integrated database retrieval system