Miscanthus floridulus: 136493883
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Entry
136493883 CDS
T10264
Name
(RefSeq) crossover junction endonuclease EME1-like
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
mflo Miscanthus floridulus
Pathway
mflo03440
Homologous recombination
mflo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
136493883
03460 Fanconi anemia pathway
136493883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mflo03400
]
136493883
DNA repair and recombination proteins [BR:
mflo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
136493883
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ERCC4
EME1-MUS81_C
RXLR
DUF6675
Motif
Other DBs
NCBI-GeneID:
136493883
NCBI-ProteinID:
XP_066346104
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All DBs
Position
11:90633204..90638400
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AA seq
594 aa
AA seq
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MASSVPVVDILDDDDDDNGLAVASPPSCKRSLGSSGISSRDFLDAFSPSPPRHKRPLPAA
EGPINLDDTLSPPKRRRSSVSIDLDDTPSPPKRQLSSVPMVPVLVVDEDVAPSAPGDVVT
DRPDSIFDCAAFSESPETVVPSSAGLGSVDVETPGFASPRSVRPPAAPGMSSAPPAQKGS
GVTSLISLDSDDESDDDIMNREPSINLPSNTEAMMCQKDDDAQHVQAKQKRQPAGKKLTK
EEKDKLMQERKQKRQEDKLRKQALKDKLANKKKMEKAIQKWESGKLALECITVEIDNSVI
QRGFIGGPLLSSLTENGLSYEPTKNKISGSILWKLDVPDDIAQAFSDLKDSCDMNQNPLS
EVKYVAIVLEAEEFCNLISNGLFFDHVQRVRDGYPGFTICYIINKLMNYVNKCEQSQYKN
HLNTWRRPPVEEVLCKLATHYINVHSRQCIDEAEVVEHLVGLTSSLAKCKFRKPITWLSV
HANGAIIPKSFVHKNLAKNDTWLKALIAIPDIQPRYAIAIWKKYPCMRSLLNEYMDASKT
VAEKERLLSDLKWEDRLGDECKRLGDKCSRRVYRMLMAQNGGLDTDDPEAGGRA
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctccgttcccgtagtcgacatcctcgacgacgacgacgacgacaacggcctc
gccgtcgcctcccctccctcctgcaagcggtccctcggatcctccggaatctcctcccgc
gacttcctcgacgcgttctcgccatccccgccccggcacaagcggcctctgcccgcggcg
gagggccccatcaacctcgacgacaccctgtccccgccaaagcggcggcgctcctcggtc
tccatcgacctcgacgacaccccgtcaccgccaaagcggcagctctcctcggtgcccatg
gtgccggttcttgtggtggacgaggacgtggcgccatcagcccctggtgatgttgttacc
gacaggcccgattctatctttgactgcgccgctttctccgagtcaccggagacggttgtg
cccagttctgccggcctcggcagtgttgatgttgagactccgggcttcgcctccccgcgc
tcggttaggccacctgctgcccctggcatgtcatctgctccgccggcacaaaaaggatct
ggagttacttctctgatatcacttgatagtgacgatgagtcggatgatgacatcatgaac
agggagccttcaatcaatttgccaagcaatacggaagcgatgatgtgccagaaggacgat
gatgcccaacatgtgcaagcgaagcagaaaagacaaccggcagggaagaaactgacaaag
gaggagaaagacaaactgatgcaagaaagaaaacaaaagcgacaggaagataaactacgg
aagcaagctttgaaagataagctagctaataagaagaaaatggaaaaagcaattcagaag
tgggaatcaggaaaacttgctttagaatgtattactgttgagattgacaacagtgttatc
caaaggggcttcattggaggtcctcttctttcaagtttgacagagaatggtctttcctat
gaacctactaagaataaaattagtggttcgattttatggaagttggatgttcctgatgat
attgctcaggcattttccgatcttaaagatagctgtgatatgaaccaaaatccattgtca
gaagtgaaatatgttgcaattgtgcttgaagccgaggaattttgtaatcttataagcaac
ggattgttctttgatcatgtccaaagagttcgtgatggatacccaggattcaccatttgc
tacatcattaataaattgatgaactacgtcaacaaatgtgagcaaagtcaatacaagaac
catttaaatacttggagacgtccaccagtggaagaggttttatgcaaactggcaacacac
tatattaatgttcactcaaggcaatgcatagatgaagctgaagtagtagagcaccttgtt
ggcctgacgtctagtcttgcaaaatgcaaattcaggaaaccaataacatggttatctgtg
catgctaatggtgcaattatccctaaaagttttgttcataaaaacctggcgaagaacgac
acctggttaaaagctttaatcgcgatccctgacatccagccaagatatgctattgcaatc
tggaagaagtatccctgtatgagatcccttctaaatgaatatatggatgccagtaaaacc
gttgccgagaaggaacgtctgcttagcgacttgaagtgggaagatcgcctgggtgatgaa
tgcaaaaggttgggtgacaaatgctctagaagggtgtacagaatgctcatggcacaaaac
ggaggcttggatacagatgaccccgaagctggcggtagagcttag
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