Miscanthus floridulus: 136493901
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Entry
136493901 CDS
T10264
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog A-like
KO
K08775
breast cancer 2 susceptibility protein
Organism
mflo Miscanthus floridulus
Pathway
mflo03440
Homologous recombination
mflo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
136493901
03460 Fanconi anemia pathway
136493901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mflo04121
]
136493901
03036 Chromosome and associated proteins [BR:
mflo03036
]
136493901
03400 DNA repair and recombination proteins [BR:
mflo03400
]
136493901
Ubiquitin system [BR:
mflo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
136493901
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
136493901
DNA repair and recombination proteins [BR:
mflo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
136493901
FA (Fanconi anemia) pathway
Downstream FA components
136493901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA2
BRCA-2_OB1
BRCA-2_helical
Motif
Other DBs
NCBI-GeneID:
136493901
NCBI-ProteinID:
XP_066346124
LinkDB
All DBs
Position
11:448337..464690
Genome browser
AA seq
1637 aa
AA seq
DB search
MVEAAARNSSMVRARTSEKASREARRGELGISTLSARKGQGTQQGGGALGLSVHGQGERK
KKTDAWAPPVRGAKGTFHASQKEIPLPRRSSFPFHFPPPPPQSAHSISNFPFSLVSVAAE
APPVRRGPGTMPRKWQVWGRPDGSIVWVPVSDAPPNPPPPGPLRPAPPHPPPPDDAPIRE
TLGPDTAGGCRIPSMADLLLQARDKLIEGDGMNGVTQGVNAAGLFSTGSGRSLAVSQRAV
RRARELVGEEVDEATNNNYKKRKQPFGGDAGLEGERANLHVPFGGGVHKDNFFPMFQTGF
GKAVLLSKDSIQKARAVLEENVENLAGAKQPMFHTGMGRSVLVSKNSIEKARTVLGGQMI
ANEGDVDGMEQFPVSQSGSGRAASISMASVQKANDVLEKNNIKIGSVEGPGRPNQSLIFQ
TGSGRPVLISKRSVERSRALLMDEDAENIGQRDTGCQLPIFQTGLGRPVAVEQSSIETAS
AVLENGDIKRSGNGDTNVCATPFQFETPKSVLMSSSLIMNDMTFTPEENTSVRAEKCFND
GGQLPLFQTGSGRPVTVSKGSIKRASAFLEPRNIAKELEAYLNDGYATSIFKTGTGKSIL
ATENSRERAQFVLEAVKQGYEDCGSPLPMFQTGSGKSVLVSESSVQKARAVLKEEEHFKL
VKMDKKIAAFASPLKTSRARIVNISSTGVSRAATLLGLEENTLSTQFFGHVSDKLGTKIT
VKRGNPEHRLDVASTSAISSGTHKGTYPTENPTHMDKHQQFGFSKSTTSDAGEHSIRFST
AGGRSMAISADALQRAKSLLGDSDLVVSPNDSIGHSLASATEKLPKSTISPKGDVSNLLH
GTIAIGYAVPDAPLTKKSANQFHMGREYRPINEIPKVPKPPSRCLSEGNNVSNAKDKTQW
HHMPTGPLVDITNYMATCSGNADHLANGKRIIGGRNSISPFKRPRSSRFVTPIKNNKLSS
AGESIVPPMQISPCRTMLSARYPFQHQRKNYKEYFGGPPCFKYLTEHATDDVKLMDARRA
EKFRFQHTDTGAEEFQKILLTCGASLSCATKEWVSNHYKWIVWKLASLERCYPTRAAGKF
LTVDNVLEELKYRYDREVNHGHRSAIKKILEGSASPSLMMVLCISAIYSCPDQNNNKLEV
NKVDTNEDNNDNQSLSATNRNMSANIELTDGWYSLDASLDMALLEQLEKRKLFVGQKLRI
WGASLCGWSGPMSFHEAPGTVKLAVHINGTYRARWNDALGFCKHVGLPLAFRCIKASGGR
VPRTLVGITRIYPVLYRERLPDGRSVVRSERMERKALELYHQRVSKITEDIMFEQQENCD
STDDNEEGAKILKMLEDAAEPEFILADMTPEQLKLFSSYIEKRNIVKQNEVSKNVEKALE
VAGLSSRDVTPFLKVRVIGLANKHSASTSSNKEGLITIWNATEMQKHNLVEGQAYSVTGL
VPSNYGTEILYLHARGSSTTWKPLASAQTTDFKPFFTPRKAIELLKFGEVLISSEFDIAG
LILYVGNTYLCSNKKKQWLFLTDGSKFISGQGCEEQDCLLAVSISSATTDEDSALFSYTL
SGNTVGFSNLVKRQKDETRQIWVAEATESSSYTLSNEIPRKSHLKEAAASAERWASRSYH
VGAFYRNTNGPCKNFKS
NT seq
4914 nt
NT seq
+upstream
nt +downstream
nt
atggtagaagcggccgcgcgcaacagcagcatggtgagggcgagaacgagcgagaaagcg
agcagagaggcgaggcgaggggagctcggcatctccacactcagcgcgaggaaggggcag
ggcacacagcaaggaggtggagcgctcggcctcagcgtccatggccaaggagagaggaag
aagaagactgatgcgtgggccccacctgtaagaggggcgaaagggacatttcatgcttcg
cagaaggaaattccgctcccgcgccgttccagttttccttttcatttccctcccccgcct
ccgcagtccgcacactccatttccaatttccccttctccctcgtctccgtcgccgcggag
gccccgcctgtgcgccgcggcccaggaaccatgccgaggaagtggcaggtctggggccgg
cccgacggcagcatcgtctgggtccccgtctccgacgcgcccccaaacccacctccgccg
ggtccgcttcgtcccgcacctcctcatccgccgccgcccgacgatgcgccaatccgagaa
accctaggcccggacaccgccggcggatgccgcatcccctccatggccgacctacttctc
caagcgcgggacaagctgattgaaggcgatgggatgaatggagtgactcagggtgtcaat
gcggctggactgttctccaccgggtctgggaggtcactggctgtcagccagagagccgta
aggagggccagggagttggttggggaggaggtggacgaggctactaataacaattacaag
aagagaaagcaaccatttggaggtgatgctggtctggagggtgaacgggcaaacttacat
gttccatttggaggtggtgtgcataaagataacttcttcccaatgttccaaactggattt
ggtaaagcagtcttgctcagcaaggactcaattcagaaggcaagagctgttctagaagaa
aatgttgagaatctagctggtgccaagcaaccaatgttccataccggtatgggtagatcg
gtcctagtcagcaagaactcaatcgagaaggcgagaactgttttagggggtcaaatgatc
gcaaatgaaggagatgtggatggtatggaacagtttcctgtgtctcaatctggttcaggt
agagctgcatcaatcagtatggcatctgtacagaaagctaatgatgtgctagaaaaaaat
aatataaaaataggaagtgtggaaggtccaggtagacccaatcagtctctgatatttcaa
actggctccggaagaccagttttgatcagcaaaagatccgtcgagagatctagggctctg
ctgatggatgaagatgctgaaaatattggacaacgggatactggctgccagctcccaatt
ttccaaacaggacttggaaggcctgttgctgtggaacagagttcaattgaaacggcaagt
gcagttttggagaatggtgatattaaaagaagtggaaatggagataccaatgtttgtgcc
acacctttccaatttgaaaccccaaaatccgttttgatgagtagcagtttgattatgaat
gacatgacttttacaccagaggaaaatacttcagtgcgagcagaaaaatgtttcaatgat
ggtggccaattgccgttgtttcagactgggtcagggaggccagtcacagtaagtaagggt
tccattaaaagggcaagtgcttttctggagccaaggaacattgcaaaggaattggaagct
tatctcaatgatggttatgccacctcaatatttaaaactggaactggaaagtctatctta
gcaactgagaactcaagggaaagggcacaatttgtcttagaggctgtaaaacaaggatat
gaagactgtggaagtccattgccaatgtttcaaactggatctggaaaatctgtattggtc
agtgaaagttcggtgcaaaaggcaagagccgttctcaaggaagaagagcacttcaaattg
gttaagatggacaaaaaaattgcagcctttgcttcacctctcaagacaagccgtgcaaga
atagtaaacatatcttcaactggtgtttctcgagctgctaccttattgggcttggaggag
aataccctttcaacacaattttttggacatgtgagtgataagttaggtacgaagataact
gttaagcggggaaatccagaacacaggcttgatgttgcatctacaagtgcaatttctagt
ggcactcataagggtacttatccaacagaaaaccccacacatatggataaacatcagcag
tttggattttctaaaagtactacctctgatgctggtgagcattccatcaggttcagcact
gcaggtggccgatcaatggctatctctgctgatgcactacaacgtgcgaaaagccttttg
ggtgattcagacttagtggtttctccaaatgattcaataggtcactctttggcatcagct
acagagaagctaccaaaatcaactatttctccgaaaggagatgtatctaacctattgcat
ggaactatagcaataggatatgctgtacctgacgcccctttgactaaaaaaagtgctaat
cagtttcatatgggaagggaatatcgtccaatcaatgaaattccaaaggtccccaagcct
ccctccagatgtttatctgaaggcaacaatgtgagtaacgctaaagacaagacccagtgg
catcatatgccaactggaccattggttgacatcactaactacatggctacatgttctgga
aatgcggaccacttagcaaatggaaagagaataatcgggggaagaaactccatatctcca
ttcaaacggccccgttcttccaggttcgtcacgccaataaaaaacaacaaactatcttct
gctggagaatccatagtgcctccaatgcagatcagtccctgtaggacaatgctatctgca
cgttatcctttccaacatcaaaggaaaaattacaaagaatattttggtggtcctccttgc
ttcaaatatttgactgaacatgcaactgatgatgtaaagctcatggatgcaagaagagct
gagaagtttaggtttcagcatacggatactggtgcagaagagtttcagaaaatactgctc
acatgtggtgcttcattgtcatgtgcaactaaagaatgggtcagtaatcactataaatgg
atcgtgtggaagcttgcttcactcgagagatgctacccaactagagctgctggtaaattc
ttgacagttgacaatgttcttgaggagcttaagtaccgctatgacagagaagtgaatcat
ggtcatcggtcagcaataaagaaaattttagaagggagtgcttcaccatctttgatgatg
gtcttgtgcatttcagctatttactcttgtcctgaccaaaataacaataagttggaggtt
aacaaggtagatactaatgaagacaacaacgacaaccaaagcttgtcagccactaataga
aacatgtctgcaaatattgaattaactgatggatggtattcacttgatgcatcgttggat
atggcacttttggaacaactagagaaaagaaagcttttcgtagggcagaagcttcggata
tggggagcttctttatgtggttggtctgggcctatgtcatttcatgaggcgcctggtact
gtcaaattagctgttcacataaatggcacctatcgtgctagatggaatgacgccttagga
ttctgcaagcatgttggactcccactggcattcaggtgcataaaagcttctggtggtaga
gttcctaggacactggttggaatcacaaggatatatcctgttctctaccgggaaaggttg
cctgatggtcgttctgtcgtgagatctgaaaggatggaaagaaaggcgctggaactatac
caccagagagtatctaagatcacagaagatattatgtttgaacaacaagaaaactgtgac
agtactgatgataacgaggaaggggctaaaattctcaaaatgctagaggatgctgctgag
cctgaatttatacttgcggacatgactccggagcagttgaagcttttctcatcttacata
gaaaagcgaaatattgttaagcaaaatgaagtatctaagaatgttgagaaggcccttgaa
gttgctggccttagttcaagggatgttacaccatttttgaaagtgagagtgattggcctt
gccaataaacattcagcttccacatccagtaacaaggaagggctaataacaatatggaat
gctactgagatgcagaaacataatcttgtggagggacaagcttattctgttacgggattg
gtgccttcgaactatggcactgaaatcctgtacttgcatgctagaggatcatctacaacg
tggaagcctttagcatcagctcagactacagattttaaaccattctttacccctcgtaaa
gcaattgaactcttgaaatttggtgaggtgctgatttcaagtgaatttgatattgcaggt
cttattttatatgttggcaatacttatttatgtagcaacaagaaaaagcagtggctcttt
ttaacagatggatctaaatttatctctggacaagggtgtgaagagcaagattgtcttcta
gctgttagcatttcgtccgcaaccactgacgaagactctgcattatttagttatactctc
tctgggaacacagttggttttagtaatctggtcaaacgacagaaagacgagacaaggcaa
atatgggtagctgaggcaacagagagctcaagctacactctttccaatgagattcctaga
aaatctcacctaaaagaagctgcagcttcggctgagagatgggcttcaagatcttatcat
gttggagccttttaccgcaatacgaatggcccttgcaaaaacttcaagagctaa
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integrated database retrieval system
