Miscanthus floridulus: 136494170
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Entry
136494170 CDS
T10264
Name
(RefSeq) arabinosyltransferase RRA3-like isoform X1
KO
K20783
arabinosyltransferase [EC:2.4.2.-]
Organism
mflo Miscanthus floridulus
Pathway
mflo00514
Other types of O-glycan biosynthesis
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
136494170
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
mflo01003
]
136494170
Glycosyltransferases [BR:
mflo01003
]
Glycan extension
O-Glycan
136494170
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nucleotid_trans
MAD
LRS4
HALZ
Prefoldin
TolA_bind_tri
DUF4404
Cnn_1N
Spc24
YqcI_YcgG
Motif
Other DBs
NCBI-GeneID:
136494170
NCBI-ProteinID:
XP_066346428
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Position
1:complement(133772715..133776550)
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AA seq
473 aa
AA seq
DB search
MVEHEAKIHHPRRITSPPLQKDRKRCSKPHLRLPLRSHPTAAGEISRMALPGRRDGPLMV
RGGGGGKPLSRGSRIAVAVAVGVALGCVCAFLYPNGLFFRPSASALQWPRQVDSTACESS
GRVTNLKSQLSSLERENVELRRQINELSMKLQKAGQGKDETLYKPGPFGTVKALRTNPTV
TPDESVNPRLAKVLEEVAVKKELIVALANNNVWEMLEVWFTNIKRVGIPNYLVVALDDNI
ESLCKSKGVPVYRRDPDEGIDNIAKTGGNHAVSGLKFRVLREFLQLGYSILLSDIDIIFL
RNPFEHLYRDSDVESMSDGHNNMTAYGFNDVFDEPSMGWARYAHTMRIWVYNSGFFYIRP
TIPSIELLDRVAGRLSHEPKSWDQAVFNEELFFPSHPGHEGLHASRRTMDIYLFMNSKVL
FKTVRKDAQLKKLKPAIVHLNYHPDKLKRMKAVIEFYVNGKQDALRHFPDGSE
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggttgaacacgaggcgaagatccaccaccctcgtcgcatcacttctcccccactgcaa
aaggacagaaaaaggtgctctaaaccccacctccggcttcccctccgatctcaccccacc
gccgccggcgagatctccaggatggcgttgcctgggcggcgggacggccccttaatggta
cgaggcggcggaggcgggaaacccctgtcacgcgggtcccgcatcgcggtggccgtcgct
gtcggcgtcgcactcggctgcgtctgcgccttcctgtaccccaacggcctcttcttccgc
ccgtctgcctctgccctccaatggccgcgccaggttgactcaactgcttgcgaatcatca
ggacgagttaccaaccttaagtcccagttgtcatcattggagagagagaatgttgaactt
aggaggcagattaatgaactatccatgaaacttcaaaaagctggacaaggaaaagatgag
actttgtacaagcctggtccgtttggaactgtcaaggctttgagaacaaatccaacagta
acccctgatgaatctgttaatcccaggttggccaaggtattggaagaggttgctgtgaaa
aaggaactcattgttgcattggcaaacaacaatgtgtgggagatgctcgaagtttggttt
accaatatcaaacgagttggtattccaaactacctggttgtggcattggatgataatata
gaaagcttatgcaaatctaaaggggttccagtttaccggcgtgatcctgatgaaggcatc
gataacattgcaaaaactggtggaaaccatgccgtctctggacttaagtttcgtgtttta
agggagttcttgcaacttggatatagtattctcctctctgacattgatattattttcttg
aggaatccatttgagcacctttacagagattctgatgtggagtccatgagtgatggccac
aataacatgacagcttatggtttcaacgacgtgtttgatgagccttctatgggttgggcc
agatatgctcacacaatgcggatttgggtttacaactctgggtttttctatattagacca
acaattccttctattgaacttcttgatcgtgtggctggccgcctttctcatgagccaaag
tcatgggaccaggcagttttcaatgaggagctgttcttcccgtctcatcctggtcatgaa
ggccttcatgcatccaggagaaccatggatatttatcttttcatgaacagcaaagtcctc
ttcaagacagtgaggaaagacgctcagctcaagaagctaaagccagcgattgtgcatttg
aactaccatcctgacaagttaaagcgaatgaaagcggtcatcgagttctatgtcaatggc
aaacaagatgcactgcgtcatttccctgatgggtcagaatga
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