Miscanthus floridulus: 136494222
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Entry
136494222 CDS
T10264
Name
(RefSeq) uncharacterized protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
mflo Miscanthus floridulus
Pathway
mflo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
136494222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136494222
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
136494222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Zn_ribbon_RanBP
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
136494222
NCBI-ProteinID:
XP_066346487
LinkDB
All DBs
Position
11:100082376..100087463
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AA seq
689 aa
AA seq
DB search
MFVPVLDNRSGFEEPFKISGMWQCSICMHVNTTDNLSCELCGVLRYLSLYFNNISEAEDG
AKCRHKYSGVSVLARSLFTPSSTESKAIVLSDGFEDSRNTTGTGNKQATMDALHKTYMTR
KKCHINIVPFKFDTPSPDDMVITGLKSSRNFRKVDTEVLVKDSIDVTRKEMMDNDVLLTE
NSASMDPSASVQLDEVGGTSSNVLSSSQNITLKLQHLSLESKPKNSKPNIKKAASVSHYK
PEPWMLQSEDQEIRKQLSLGIVGHVDSGKSTLCGRLRHALGLISKKQMHKYEKEAKEKGK
GLFAYAWAMDESSDERERGITMTVAVAYFNSEKYRVVLLDSPGHKDFVPNMISGATQADA
AILVVDASIGSFEAGMGVNGIGQTKEHSQLIRSFGVENLIVAVNKMDVVEYSKERFQSIK
SQLGTFLRSCGYKDSSVTWVPLSAMANENLVTASSDSRLLSWYNGDCLLKAIDSLSPPHR
DVSRPLCLPICDVIASHTLGQVAVCGKIESGGIRTGSKVLVMPSGDIATVRTIERDSSTC
SLARAGDNVAIGLHGIDPGHIVSGGVLCHPDFAVCIASHLELKILVLEITMPILVGLQFE
LHIHHARVSARLVKILSSSDQKTGKALKKMPRLLTARQTAVVEVKLDKEVCVEEFSTLKA
LGRVFLRSQGNTVAVGIVTRILDQACDLA
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttcctgtgctagataacagatctggttttgaggagccctttaaaatttctggg
atgtggcaatgctccatttgcatgcatgtaaatactacagataatttatcttgtgagcta
tgtggtgtacttcgttatctctcactgtatttcaataatatcagtgaagccgaagatgga
gctaaatgcagacacaagtattctggagtatccgtactcgcaagatctctttttacacca
tctagtacagagtcaaaggctattgttctctctgatggttttgaagacagtagaaataca
acaggcacagggaataagcaagctaccatggatgctctacataagacatacatgactcgc
aaaaagtgccacattaacatagtgcctttcaagtttgatacaccatctccagatgacatg
gtcattacaggcttaaaatcatccagaaactttagaaaagttgacacagaggttctagtt
aaagattctattgacgtgaccagaaaggagatgatggataatgatgttcttctaactgaa
aacagtgcaagtatggacccaagtgcatcagtacaattggatgaagttggtgggactagt
agcaatgttctttcgagtagtcaaaatataactcttaagctacagcatttgagtttggag
agcaaaccgaagaacagtaaacccaatattaagaaagcagcttctgtttcacactacaag
ccagaaccatggatgctccagagtgaagatcaagaaatccgtaaacagctaagtcttggc
attgttggtcatgtcgattctgggaaatcaactttatgtggtcgattacgacatgctctg
ggattgatttcaaaaaaacaaatgcataaatatgagaaagaagctaaagaaaaggggaaa
gggttgtttgcatatgcttgggctatggatgagagcagtgatgagagggagcgtggcatt
acaatgactgtggctgtagcatattttaatagcgaaaaataccgtgtggttttgcttgat
tcccctggtcacaaggattttgttcctaatatgatatctggtgctacacaagctgatgcc
gccatcctagttgttgatgcatctataggctcatttgaagctggcatgggtgttaatgga
attggtcaaacaaaggaacactcacaacttattaggagctttggtgttgagaacttgata
gttgctgttaataagatggatgtggtggaatattcgaaggagcggttccagtccattaaa
tcgcaacttggtacctttcttcggtcatgtgggtacaaagactcttcagtcacctgggtt
cctttgagtgcaatggcaaacgaaaatttagtcacagcttcttcagattctcgtcttcta
tcatggtacaatggagattgtctgctgaaagccattgactcattatctcctcctcatcgt
gacgtttcaaggccactatgccttccaatatgtgatgttattgcatctcacacgctgggt
caggtggctgtttgtggtaaaatagagtctggagggatccgaactggctctaaggttctt
gtcatgccttctggagatatagctacagtaagaaccattgagcgggattcctctacttgc
agcttggctagagccggggacaatgttgccattggtttgcatggtatcgaccctggtcac
attgtgtcaggtggagttctttgccatccagatttcgctgtgtgcatcgcttctcacttg
gagctgaaaattctggttctagaaatcaccatgccaatactggttggccttcagtttgag
ctgcacatacatcacgccagggtgtctgcgaggttggttaaaatactgtcgtcgtcggac
cagaagactggcaaggccttaaagaaaatgccacgtttgctcaccgcgaggcagaccgcc
gtggttgaagtgaagctggacaaagaagtgtgtgtggaggaattctcgacgctgaaggcc
cttgggcgggtgttcctgcgatctcagggtaacactgttgcggtgggcattgtgactcga
attctggatcaggcttgtgacctcgcctaa
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