Miscanthus floridulus: 136494553
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Entry
136494553 CDS
T10264
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UPL3-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
mflo Miscanthus floridulus
Pathway
mflo04120
Ubiquitin mediated proteolysis
Brite
Enzymes [BR:
mflo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
136494553
Ubiquitin system [BR:
mflo04121
]
Ubiquitin ligases (E3)
HECT type E3
136494553
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NCBI-GeneID:
136494553
NCBI-ProteinID:
XP_066346801
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Position
11:complement(15678630..15695382)
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AA seq
1863 aa
AA seq
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METRSRKRAEASSSSATSSSRSSKRSRPNPNPPAASSPAPNPVPLPPRTRRSAAVDPLPA
MDSSGDNNSNPNPPPRRRGRTSNADKGKEQQQPEPSHSSRVREAERLLGLGFEGIEDDDD
AGFGAGAIPHSLTSASTALQGLLRKLGAGLDDILPSSALSAAAASSSSASGQLSGRLKKI
LAGLRADGEDGRQVEALTQLCEMLSIGTEESLGAFSVDSFVPVLVGLLNHESNPDIMLLA
ARALTHLCDVLPSSCSAVVHYGAVPCFCARLLTIEYMDLAEQSLQALKKISLEHPTACLR
AGALMAVLSYLDFFSTGVQRVALSTAANMCRKLPSDASDFVMEAVPLLTNLLNYHDSKVL
EHASVCLTRIVEAFSPFPEKLDELCNHGLVAQAASLVSVSNLAGQASLSTSTYTGVIRLL
SICASGSPLAAKTLLLLGISGTLKDILSGSGLVAGTTVSPALTRPADQMNEIVKLADELL
PPLPVGTISLPMYSDVHMKGSSVKKSTSSKQSEHGSTGNELSGREKLLRGQPELLQQFGM
DLLPTMTQVYGSSVSGPIRHKCLSVIGKLMYFSSAEMIQSLLSTTNISSFLAGILAWKDP
QVLIPALQIAEVLMEKLPEIFVKMFVREGVVHAVESLICPEFTGQVTPQVSQLDNHVDSI
TSQNRRNRRRNNAVNTENSLPDGSKGSHSVIANSPPSTAEVPNNSLRALVSNHAKSFKDK
YFPSEPGSSDIAVTDDLLKLRALCAKLNTTADTIKTKAKGKSKAVVGNSFDVLCNIEEQL
DGIIAEMLSELSKGDGVSTFEFIGSGVVTALLTYLSCGTFGREKVSEANIPNLRHQAVRR
YKAFISLALPNDKSGNRTPMAFVVHKLQSALSSLERFPVVLSHSGRAPTLGGSRLTAGLA
XVSQPVKLRLCRAPGEKSLKDYSSNIVLIDSLASLAAVEDFLWPRVQRTEPVSKPPVSSA
NNSESGAASSTAPSIPPGIQSGRRASLRSQSSATTSGAIKKDYQEGSINTSKGKGKTVLK
LSLDESKGPHTRNAARRKAASEKDVELKPSHGHNTSEDEDLDASPVEIGDALMLDDDDED
VSEDEDDDHEAVLRGSLPSCVPERVHDVKLGAADDNQAQPSSGSSTKNTSGRGLDAAEFR
SPSTFGSRGAMSFAAAAMAGLTSVGSRGIRGSRDRNGLPLGARTTERHNKLIFTAGGKQL
NKHLTVYQAVQRQVVHDEDDEDRLGGSDLPDDGNHFWGDVFTITYQKADNTAEKGSVGGS
ASVPKPSKSDSSKTLSEKSCTSLLDSILQGELPCDLEKSNQTYNILSLLRVLEGLNQLSP
RLKLQATCDDFAEGKVATLDGLYDVGAKVPSEEFVNSKMTPKLARQIQDVLALFSGSLPS
WCYQLTKACPFLFPFETRRQYFYSTAFGLSRALHRLQQPGDNTNTAFEREVRVGRLQRQK
VRVSRNRILDSAAKVMEMFSNQKAVLEVEYFGEVGTGLGPTLEFYTLLSRELQRVDLGLW
RSHSPDDSGMQIDENADDLTDEKRESESLVESRNIVQAPLGLFPQPWPPSAAASEGSKFF
KVVEYFRLVGRTMAKALQDGRLLDLPLSTAFYKLLLGQELDLYDILSLDTEFGKTLQELQ
ILVARKQFLESCSSESQKIEELCFRGAPIEDLCLDFTLPGYPDYVLKEGGENAVVNIYNL
EEYISLVVDATVKTGIMRQVEALKAGFNQVFDISSLQIFSPQELDYLICGRRELWEPETL
PEHIKFDHGYTSKSPAIVNFLEIMAEFTPEQQHAFCQFVTGAPRLPPGGLAALNPKLTIV
RKHSSVANNTSNPTGATESADDDLPSVMTCANYLKLPPYSTKAIMLKKLLYAINEGQGSF
DLS
NT seq
5592 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgcgcagccgcaagcgggcggaggcctcttcttcttccgcgacctcctcctcc
cgctcctccaagcgctcgcggcccaaccctaaccctcccgccgcctcctcccccgccccc
aaccccgtgccgttgccaccacgcacccgccgctcggccgctgtcgaccccctccccgct
atggactcctcgggcgacaacaactccaatcccaacccgccgccgcggcgccgcggccgc
acctccaacgcagataagggtaaggagcagcagcagccggagccctctcacagctcccga
gtgcgcgaggccgagcgcctgctgggcctaggtttcgagggaattgaggatgacgacgat
gcggggttcggggctggggccatcccccacagcctgacttctgcgagcaccgcgctccag
gggctgcttaggaagcttggtgctggcctggacgatatactgccgtcgtcagcactgtca
gctgcagccgcgtcatcgtcatcagcatccgggcagctgagtgggaggttgaagaagatt
cttgcggggttgcgtgctgatggagaggatgggcggcaggtcgaggcgttaacacaactc
tgtgagatgctgtccattggcacagaagagtctcttggggcattctcggtggactcattt
gtccctgtcctggtcgggctgctcaatcacgagagcaacccagacatcatgctgctcgca
gcacgagccctaactcacctctgcgatgtgctgccgtcttcttgctctgcagttgtgcat
tatggtgctgtgccttgcttttgtgcccggcttctcaccattgaatacatggacttggcg
gagcagtcattgcaagctcttaaaaaaatatccctggagcatccaactgcctgcttgcgg
gctggtgcactaatggcagtcctatcataccttgactttttctccacaggtgttcagaga
gttgcattatctacagctgctaatatgtgtaggaaacttccttctgatgcatcagatttt
gtaatggaagcggttccacttcttactaatctactgaactaccatgattcaaaagttctg
gagcatgcttctgtctgccttacccgtattgtggaagctttttcaccatttccagaaaaa
ttggatgagttgtgcaatcatggattggttgcacaagctgctagcttagtatctgttagc
aacttagcaggacaggcatccttgagtacatcgacatatacgggtgtgattcgtctgctc
tcaatatgcgcaagtggatcacctctggcagctaaaacacttctccttcttggaattagt
ggcacacttaaagatatcctttcaggctctgggttggttgctggcacaactgtgtcccct
gctttaacaagaccagccgatcagatgaatgagattgtgaagcttgcagatgagttactt
cctcctctgcctgttgggaccatttctttaccgatgtattccgatgttcacatgaaaggt
tcttctgtaaagaaatccacttctagtaagcagagtgaacatggttcaacaggaaatgaa
ctatcaggtcgggagaagttattgcgtggtcagcctgaacttctgcagcaatttggtatg
gacctgttacctaccatgacacaggtgtatggctctagcgtaagtggaccaatacgccac
aagtgcttatctgtcattgggaaattaatgtactttagctcagccgagatgatccagtct
ctccttagcacgacaaacatttccagctttttagctggcattttagcttggaaagatcca
caagtgctgatccctgctcttcagatagcagaagttttaatggaaaagcttccagagata
tttgtgaagatgtttgtgagggaaggcgttgttcatgctgttgagtcacttatatgccca
gagttcactggtcaagtgactcctcaagtgtcacagctggacaatcatgtggattccatt
acatcacaaaataggcgcaaccgccggcgaaataatgctgtgaatactgaaaacagcttg
cctgatggatcaaaaggttcccattctgtgattgccaattcaccaccgagcacggctgaa
gttccaaataatagtctccgtgctttagttagtaatcatgcaaagtcatttaaggataag
tatttcccttcagagcctggctctagtgacattgcagttactgatgatctccttaaactg
agggcactttgtgcaaaactgaatacaacagctgacactatcaaaacaaaagctaaagga
aaatcgaaggctgtagtaggcaatagctttgatgtgttatgcaatattgaggagcaattg
gatggtataatagctgaaatgttgtctgagcttagcaagggggatggcgtttcgacattt
gagttcatcggaagtggagttgttacagctttgctaacctatctgtcatgtggaacattt
gggagggaaaaggtgtctgaagcaaacataccaaatttgcgtcatcaagcagtcagacgc
tacaaggcatttatatctcttgcccttccaaatgataaaagtgggaatagaactcctatg
gcattcgtagtccataaactgcaaagtgccctctcttcgttggaacgtttcccagttgtg
cttagccattctggaagagcgccgactttgggaggatcccgcctgacggcaggcttagct
nnagtgtcacagcccgtcaaattgcgtctttgtcgagcgcctggtgaaaagtcacttaag
gattattcatccaatattgttcttattgactcattagcaagtctggcagctgttgaagat
tttctttggcctagagtccagcgcacggagccagtctcgaagcctccagtctcatctgca
aataattctgaatccggagcagcaagttccactgcgccttcaattccgccaggaattcaa
tctggccgtcgagcatcattaagatcacagtcatcagctaccactagtggtgcaattaag
aaggattatcaggagggaagcataaacacatcaaagggaaaaggaaaaactgttcttaaa
ttgagtttggatgaatctaaaggcccacatactaggaatgctgcacgaagaaaagctgct
tcagagaaagatgttgaactgaaaccatcacatggtcacaacacttcagaggatgaagat
cttgatgcttctccagttgagattggtgatgctttaatgcttgatgacgacgacgaggat
gtctccgaggatgaagatgatgatcatgaggcagttctccgagggtctcttccttcctgt
gttcctgagagagtgcatgatgtgaaattaggagctgctgatgataaccaggcacagccc
tcatctggttccagtacaaaaaatacttctggcaggggattggatgctgctgaatttaga
agtccaagcacatttggttcacggggtgcaatgtcatttgctgcagctgcaatggctgga
ttaacttcagtaggtagtcgtggtattagaggtagccgagatcggaatggccttccattg
ggtgctcgtacaaccgagcgtcacaacaaattgatatttacagctggtgggaagcagctt
aacaaacatttgactgtatatcaagctgttcaaaggcaagtagttcatgatgaggatgat
gaagatcggttaggtggatctgatttacccgatgatggtaaccacttctggggtgatgta
ttcactataacatatcagaaggctgataacacagcggagaaggggtctgttggaggttca
gcttcagtgccaaaaccttctaaatcagattctagcaaaactttgtctgaaaaatcgtgc
acttctcttcttgatagtattttgcaaggagagcttccctgcgatttagagaaatcaaac
caaacctacaatatcttatcactattacgtgtgttggagggcttgaatcagttatctcct
cgtctgaaactgcaggcaacctgtgatgattttgctgaaggaaaagttgctacgttggat
gggctatacgatgttggagctaaggtaccctcagaggagtttgtcaacagtaagatgacc
ccaaaacttgctcggcaaattcaggatgttcttgcactgtttagtggcagtttgccatct
tggtgttatcagctgacgaaagcttgtcctttcctgtttccttttgaaacacgaagacaa
tacttctattccacagcttttgggttgtctcgtgcactgcatcgtcttcaacaaccgggt
gataatactaacactgcttttgaaagagaagtcagggttggtagactgcaacgccagaaa
gtccgtgtttctcgtaaccgtatcttggattctgcggctaaagttatggagatgttctct
aatcagaaggctgtcctagaagttgaatactttggtgaagttggaactggacttggtcca
actttggagttttatactctcttaagccgtgagctgcaaagggttgacttaggattatgg
agatctcattctccagatgattctggcatgcaaattgatgaaaatgctgatgatttaaca
gatgaaaagcgtgaatcagaatcacttgttgagagcaggaacatagtacaagcacctctt
ggtttatttcctcagccttggccacctagtgctgctgcatcagaaggtagcaaattcttc
aaagttgtcgagtatttccgcttagttggtcgaacgatggcaaaagcattgcaagatgga
aggcttcttgatttgcctttgtcgacagcattttacaaacttctgcttggacaagaactt
gatttgtatgatatattatctttggatactgagtttggaaagacattgcaagaactgcaa
attctcgttgcacgtaaacaatttcttgagtcctgctctagtgagagccaaaaaatagaa
gaattatgtttccgtggtgctcccattgaagatttatgtttggactttactcttccgggc
tatcccgattatgttctcaaggaaggtggagagaatgcagtggtcaacatttataactta
gaagagtatatttctttggttgtggatgctactgttaagaccggaataatgcggcaagta
gaggcattgaaggcaggattcaatcaggtgtttgacatatcatcactccaaatattttct
cctcaagaacttgattatctgatttgtggtcgccgtgaactttgggagccggaaacactg
cctgaacatataaaattcgaccatggttatacctctaagagtcctgcaattgtcaatttt
cttgagatcatggcagaatttactcctgagcagcaacatgctttctgccagttcgtgact
ggtgctcctcggcttccacctgggggtttggctgccctaaatcctaagttgactattgtt
aggaagcactcatctgtggcaaataatacttcaaatccaactggagcaacagagtctgca
gatgatgatttacctagtgtcatgacttgtgccaactatcttaaactgccaccatactcc
accaaggctatcatgttaaagaaactgctttatgcgatcaacgaaggccaagggtcattt
gatctttcgtga
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