Miscanthus floridulus: 136494764
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Entry
136494764 CDS
T10264
Name
(RefSeq) vacuolar protein-sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
mflo Miscanthus floridulus
Pathway
mflo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
136494764
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mflo04131
]
136494764
Membrane trafficking [BR:
mflo04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
136494764
Hops complex
136494764
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS11_N
PEP5_VPS11_N
TPR_PEP5_VPS11
Clathrin
VPS11_C
zf-C3H2C3
TPR_Vps41
zf-C3HC4_2
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
136494764
NCBI-ProteinID:
XP_066347035
LinkDB
All DBs
Position
11:32818897..32831918
Genome browser
AA seq
960 aa
AA seq
DB search
MYQWRKFEFFEEKSAGRGGGGGGSAAAVPAEIAGRVTCCSGGRGRVAVGCDDGTVGLLDR
GFRLSYGFQAYASSVLFLQQLKQRNVLVTVGDDDQSSSQSSAICLKVFDLDKVQEEGSST
TTPFCVQILRVFTDQFPQAKITSFMVLEEAPPILLIAIGLDNGFTYCIKGDIARERITRF
KLQVEAAADGSTSLRITGLGFRVEGQAHQLFSVTPGSVTLFSLHVQPPRRQTLDQIGCQT
NAVAMSDRMDLIIGRPEAVYFYEVDGRGPCWAFDGEKKFVGWFRGYLLCIIEDQRTQKST
LNVYDLKNRLIAHSMPVGDVSHLVCEWGYIILIMADKKILCIGEKDMESKLDMLFKKNLY
TVAINLVQSQQADPASTAEVLRKYGDHLYGKQEYDEAMSQYIHTIGHLEPSYVIQKFLDA
KRIYNLTNYLEKLHDRGLASKDHTTLLLNCYTKLKDVEKLNHFIKDEDGVGEIKFDVETA
IRVCRAAGYHEHAMFVAKKAGRHELYLKILLEDLGRYDEALQYISGLEANQAGLTVKEYG
KILVEHRPAETVEILLRLCTDVGDPTTRRGSNSMHLLTIPSPMDFVNIFVHSPQYLMEFL
ENYIKAVTDSPAQTEIHNALLELYISNDLSFPSISQENEYENHYIKETKGKETANGYRPG
IKEKADLGKEDPKIAKNIVGRRRKGLALLKSAWTSEMEDPLYDVDLALILCNTNAFKDGL
LFLYEKLKLYKEVISCYKQAHDHQGLIACCKKLGDSSQGGDPSLWGDLLKYFGELGEDCS
KEVKEVLTYIEKDDVVPPIVVLQTLSKNPCLTLSVVKDYIARKLEQESKLIEDDRKSIDK
YQGETELMKREIEDLKTNAKVFQLSKCSACTFTLDLPAVHFMCMHSFHLRCLGDNEKECP
ECAPECRSVMEAKQKLEQNARDHDLFFRQLRGSKDGFSVIADYFSKGIVSKTTVPPENGQ
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgtaccagtggcgcaagttcgagttcttcgaggagaagtcagccggccgaggcggcggc
ggcggggggtcagccgccgccgtcccggccgagatcgcgggccgcgtcacctgctgctcg
ggcggccggggccgcgtcgcggtggggtgcgacgacggcaccgtgggcctcctcgaccgc
gggttccgcctctcctatggcttccaggcctacgcttcctccgtcctcttcctccagcag
ctcaagcaaagaaatgttcttgtcacggttggagacgatgaccagtcatcttcgcagtca
tcggcaatctgtctaaaagtttttgaccttgataaagtacaagaagaaggatcaagtaca
acaactcctttctgtgttcaaattttgcgggtcttcactgatcaatttcctcaagcgaag
attacatcatttatggttctagaagaagcaccacccatactgttgattgccattggactg
gacaatggtttcacttattgcatcaaaggtgacattgcacgtgagcgtattacacgtttc
aagttgcaagttgaggctgctgcagatggcagcactagtttgcgtattactggtcttggt
ttccgagttgaggggcaagcacaccagctcttttctgtaactcctggctctgtaaccttg
ttcagcttgcatgttcagccaccaaggaggcaaacacttgatcagattggttgtcagacc
aatgctgtagcaatgagtgaccgtatggacttaattattggtagacctgaagctgtatat
ttctatgaagtcgatggtagaggcccttgctgggcatttgatggtgagaaaaagtttgta
ggttggtttcgaggctatttactctgcattatcgaagatcagaggacacagaagagcact
cttaatgtttatgatcttaagaatcggttgattgcacatagcatgcctgtgggggatgtt
tcacacttggtatgtgagtggggttatattattctcataatggcggacaaaaagattctg
tgcattggagagaaagacatggaaagtaagcttgatatgttgttcaagaaaaatctttat
acagttgcaatcaatcttgtacaaagtcagcaggctgatcctgcttccactgctgaggtg
ctgcggaagtatggtgaccatctgtatggaaaacaggaatatgatgaggctatgtcccag
tatatccacactattggtcatcttgaaccatcgtatgttatacagaagttccttgatgca
aagcgcatctacaacctgacaaattatttagagaagttacatgatcgagggttagcatcc
aaagaccacaccacccttctgttgaactgctataccaaattgaaagatgtggagaaactt
aaccatttcatcaaagatgaagatggggttggtgagatcaagtttgatgtggaaactgcc
ataagagtatgccgcgcagctggatatcatgaacatgctatgtttgtggcaaaaaaggct
gggaggcatgagttgtacttgaagattttacttgaggatcttggtagatatgacgaggca
ctgcaatatatatctggcctcgaggcaaatcaagcaggtcttactgtaaaagaatatggg
aaaattcttgtggaacatagacctgctgaaacagttgaaatactgttaaggctctgtaca
gatgttggagatcctacgacgagaagaggttcgaacagtatgcacttgcttacgatacca
tccccaatggactttgtgaatatatttgtgcacagcccacaatatctgatggaatttctg
gaaaattatatcaaagcagtgacggactcacctgcgcaaacagaaattcataacgccctt
ttggagctctatatttcaaatgatttgagcttcccgtctatctctcaagaaaatgaatat
gagaatcactatatcaaagaaacaaaaggtaaagaaactgctaatggctataggccagga
ataaaggaaaaagctgatcttggaaaagaagatcctaaaatagcaaagaatattgttggt
aggagaaggaaagggcttgcattactcaagtctgcttggacatctgagatggaagatcct
ttgtatgatgttgatcttgctctcattctttgtaatactaatgcattcaaagatgggttg
ctctttctatatgagaaactaaaactttacaaagaggttattagttgttacaagcaagca
catgatcatcaaggtttaattgcatgttgcaagaagttgggggactcgtctcaaggaggg
gatccttctctgtggggtgatctattgaagtattttggggagcttggggaagattgctct
aaagaagttaaagaggtgttgacctacattgagaaggatgatgttgtgcctccgatcgtt
gtgctacaaacactatcaaaaaacccatgcttgacactctcagtcgtcaaagattacatt
gctcgcaagcttgagcaagaatcaaagctaattgaagatgatagaaaatctattgataag
tatcagggggagacagagttgatgaaaagggagatagaagatctcaagacaaacgcgaag
gttttccaactgagcaagtgtagtgcgtgcactttcacccttgatctgcctgctgtccat
ttcatgtgcatgcactcgttccaccttcgctgccttggtgacaatgaaaaagaatgccca
gaatgcgcacctgaatgtagatctgttatggaggcaaagcagaagctagaacaaaacgct
agggaccatgatctctttttcaggcaattgaggggttcgaaggacggcttttctgtcatt
gcagactattttagcaagggcatagtgagcaagacaaccgtacctcctgagaacggacag
tag
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