KEGG   Miscanthus floridulus: 136494886
Entry
136494886         CDS       T10264                                 
Name
(RefSeq) histone deacetylase 9 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
mflo  Miscanthus floridulus
Pathway
mflo03082  ATP-dependent chromatin remodeling
mflo03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:mflo00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    136494886
   03083 Polycomb repressive complex
    136494886
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mflo03036]
    136494886
Enzymes [BR:mflo01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     136494886
Chromosome and associated proteins [BR:mflo03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     136494886
   HDAC complexes
    Sin3A-HDAC complex
     136494886
    BRAF-HDAC complex
     136494886
    REST complex
     136494886
    SHIP complex
     136494886
    MiDAC complex
     136494886
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     136494886
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    136494886
  Chromatin remodeling factors
   NuRD complex
    136494886
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 136494886
NCBI-ProteinID: XP_066347150
LinkDB
Position
11:40838178..40848879
AA seq 499 aa
MPHPKTLPLPSRLDLDGGSLPFLVLVHDRAATPPSAAAAGARSGPGSVSLDDLDFLCSRC
RGWAVRSEAMLEKDRISYFYDGDVGNVYFGPNHPMKPHRLCMTHHLVLSYGLHKKMEIYR
PHKAYPIELAQFHSADYVEFLHRITPDTQHLYASELTRYNLGEDCPVFDNLFEFCQIYAG
GTLDAARRLNHKTCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDI
DVHHGDGVEEAFYFTDRVMTVSFHKYGDLFFPGTGDIKDIGEREGKYYAINIPLKDGIDD
ASFTRLFKTIIAKVVETYLPGAIVLQCGADSLARDRLGCFNLSIEGHAECVKFVKKFNIP
LLVTGGGGYTKENVARCWAVETGVLLDTELPNEIPNNEYIEYFAPDYTLKVPNLNMDNLN
SKTYLSSIKVQVMESLRSIQHAPGVQMQEVPPDFYIPDFDEDELDPDERVDQHTQDKQIH
RDDEYYEGDNDNDHDDGTR
NT seq 1500 nt   +upstreamnt  +downstreamnt
atgccccacccaaagacacttccgcttccgtctcgtttggaccttgacggcggctctctc
cccttccttgtgctcgtgcacgaccgcgccgccacacctccatccgccgccgccgccggc
gctaggtccggtccgggctccgtttccctggacgaccttgattttctctgctcccgctgc
cgcggctgggctgtcaggagtgaagcgatgctggagaaagaccggatatcctacttctac
gacggagatgttggcaatgtctactttgggccgaatcaccccatgaagcctcatcgtctc
tgtatgacacatcaccttgttctttcgtatggacttcataaaaagatggagatatataga
ccacacaaagcttatccaatagagcttgcccagttccattctgctgattatgtggaattc
ttgcaccggataactcctgacacccagcacctatatgcaagtgaattaaccagatacaat
cttggagaagactgtccggtctttgataatttgtttgagttctgccaaatctatgctgga
ggaactttagatgctgctcgcagattaaatcataaaacatgtgacatcgccattaattgg
gctggtgggctgcatcatgccaaaaagtgtgaggcatcaggcttctgttacattaatgat
cttgtattaggaattctggagcttctcaagtaccatgccagggttctttatattgacatt
gatgtccatcatggagatggagttgaagaagccttttatttcactgacagggtaatgact
gtgagtttccacaagtatggtgatctgttctttcctggaacgggtgatattaaggatata
ggagaaagggaaggaaaatattatgccatcaacattccacttaaagatgggatagatgac
gctagctttactcgactttttaaaacaattattgccaaagttgttgagacatatctgcct
ggtgctattgttcttcaatgtggggctgattcattggcgagggaccgtctaggctgcttc
aacctctccattgaaggccatgctgaatgtgtaaagtttgtcaagaaattcaatattcct
cttctggtaactggaggtggtggatacaccaaggagaatgtagcaaggtgttgggctgtt
gaaactggggtccttttagacacagaactccccaatgagattccaaacaatgaatacatc
gagtactttgctccagattatacattgaaagttccaaatttgaacatggacaatttgaac
agtaagacctatctcagttcaatcaaagtgcaagtgatggagagtttgcggtccatacag
catgctcctggtgttcaaatgcaagaggttcctcccgatttttatatcccggattttgac
gaagatgaattggatcctgatgaacgtgttgaccagcatacccaagacaagcagattcac
cgtgatgatgaatactatgaaggtgacaatgacaatgatcacgacgatggcacacgctaa

DBGET integrated database retrieval system