Miscanthus floridulus: 136495491
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Entry
136495491 CDS
T10264
Name
(RefSeq) LOW QUALITY PROTEIN: peroxisomal ATPase PEX6-like
KO
K13339
peroxin-6 [EC:3.6.4.-]
Organism
mflo
Miscanthus floridulus
Pathway
mflo04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
136495491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mflo04131
]
136495491
Membrane trafficking [BR:
mflo04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
136495491
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_16
AAA_5
AAA_lid_3
AAA_22
RuvB_N
nSTAND3
AAA_17
AAA_28
RNA_helicase
AAA_14
AAA_7
ATPase_2
Rad17
AAA_18
NPHP3_N
TsaE
AAA_25
DUF815
Cytidylate_kin
Parvo_NS1
AAA_33
nSTAND_NTPase5
AAA_24
nSTAND6
AAA_2
Mg_chelatase
TIP49
IstB_IS21
PhoH
Sigma54_activat
ATPase
Motif
Other DBs
NCBI-GeneID:
136495491
NCBI-ProteinID:
XP_066347510
LinkDB
All DBs
Position
12:complement(72822860..72828383)
Genome browser
AA seq
929 aa
AA seq
DB search
MVEMRQRRKPLVLASTQALLDSLPGDRPPPPPQEPVRLRAGVLRFPSGAGAGAEFGELAS
FVALPASALRRLAVVTGTPVLVKNTDNNVGRIVKAVLFDNPCLDESRSEHTEKVVSAYPS
DRAMGFLPCRTFPATGFASMDEDVAYVSPLLAFNLGLHVSCLKLLIQRGGQPFKFCSQAE
ETDATASAGSDLSLHLDLLPCPQVPKYALHLRVSVVRIPDCGVLASLKINSSFGGSDYQD
MVDQALNEYFKFDRFLARGDVFCIQNSWNCGASCCLACNKQDNKLHLRNMMYFKVTSMEP
SDEPILRVNCNETALVLGGAASAAIPPYSFFAASGNSVPLHGEIVEHLASIIAPALCPSD
ILPKIKFSTFLYGPSGCGKRTVLRHVANHLGLHVVECSCHDLMTSSESGAPAALATAFKE
AQKYSPCIILLRHFDAIGNASSNEGPQSEQSGVASNIESVIKQYTGQCWVAKDSLPGKDV
NGSSYLVEPECVSSLQIILVATADSSEGMQQSIRRCFRHEIDMKTMDEEQRNKLISETLQ
GIPKVADESIGDKFVKDLAVQTSGFMPRDILALVADAGVSFAHKIASGKDSKGISKHEEI
LPESSSATQNEEKHFCKEDIMSSLERAKKRNRAALGTPKVPNVKWEDVGGLEEVKKVILD
TIQLPLMYKHLFSSKLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYV
GESEKNVRDIFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSD
NSQDLFIIGATNRPDLLDSALLRPGRFDKLLYVGVNTDASYRERILKAQTRKYKLHRNVS
LLSVAQRCPPNFTGADIYALCADAWFHAAKRSVKTFEIDTSRSNDASAEDVIVEIDDFIT
VLGDIAPSLSLEELQNYEQLRQKIEGPSR
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggtggagatgcggcagcggaggaagccgctggtcctcgcctccacgcaggcgctcctc
gactcgctcccgggggaccgcccgccgccaccgccgcaggagccggtgcgccttagggct
ggcgtcctccgcttcccctccggcgccggtgctggcgccgagttcggggagctcgcgtcc
ttcgttgccctccctgcctccgcgctccgacggctcgcggtcgtcaccggcacgccggtg
cttgtcaagaatactgacaataatgttgggaggattgtcaaagcagtattgtttgataac
ccgtgccttgacgagtcccgctcagaacatactgagaaagttgtctctgcctatccttct
gatcgtgcaatgggcttcttaccttgtcgcacgttccctgctactggttttgcgtctatg
gatgaagatgttgcttatgtcagcccacttttggcattcaacttggggttgcatgtttct
tgcctcaagcttcttattcaaagaggaggacagcctttcaagttctgttctcaagctgaa
gagactgatgcaactgccagtgctggaagtgatctttctcttcacttagaccttcttcca
tgccctcaagtgcctaaatatgcgttgcatttacgagtttctgttgtgaggattcctgat
tgtggtgtgcttgcttctttaaagataaattcatcctttggaggaagtgactaccaagac
atggtagatcaagctttgaatgagtactttaagttcgataggttcctagcaagaggagat
gttttttgtatacaaaacagttggaattgtggcgcaagctgctgcctggcatgcaataag
caggataataaactgcatctgcgtaatatgatgtactttaaggtgactagcatggaacca
tcagatgaacctatacttcgtgttaattgcaatgaaacagcccttgtgcttggtggagct
gcttctgctgcaatccccccttattccttctttgctgcttctggtaattcagtacctttg
cacggtgaaatagtggagcatttagcatctatcattgcgccagcattgtgcccttcagat
attttaccaaaaatcaagttttccacttttttatatggcccgtcaggatgtggaaagcgc
acagtgcttaggcatgttgctaaccatcttggtctgcatgtggtcgagtgtagctgtcat
gatctaatgacgtcatcagaaagtggggcacctgctgcacttgcaactgccttcaaagaa
gctcagaagtattctccttgtataatacttcttcgccactttgatgcaattgggaatgca
tcctccaacgaaggtccacagtctgagcaatctggggttgcatcgaacattgaatctgtc
attaagcagtacactggacaatgttgggttgctaaggattcgctgccaggaaaagatgta
aatgggagctcatacctcgtggagcctgaatgtgtaagctctcttcaaattatactagtt
gcaactgcagacagttctgaaggaatgcaacagtcaattagaagatgcttccgccatgag
atcgacatgaagactatggatgaagaacagagaaacaaactgatatctgagacacttcaa
ggcattcctaaagttgctgatgagagtattggtgacaagtttgtaaaagatttagcagtg
caaacgtcaggtttcatgcccagggacatacttgcactggttgcagatgctggtgtatct
tttgcgcataaaattgcatcagggaaagatagcaaaggaattagtaagcatgaggagatc
cttccagaaagctcttctgccactcaaaatgaggaaaaacatttctgcaaagaagatatt
atgtcttccttggaacgagccaagaaaaggaatcgtgctgcactgggcacacccaaagtt
cccaatgtcaaatgggaggatgttggtgggctagaggaagtgaaaaaggttattctagat
actattcagttgcctctgatgtacaagcacctgttttcttctaaattgcgcaagcgatca
ggtgtcctgctatatggacctccaggaacagggaagaccttactcgcgaaagcagtagca
actgaatgctcattgaactttcttagcgtgaaaggcccagaactgataaacatgtatgtt
ggagaatcagagaagaatgttcgagatatttttgaaaaggctagatctgcacgcccatgt
gtcattttctttgatgagcttgattccctcgctcctgcacgaggatcctcagcagattct
ggcggtgttatggacagggttgtttcccagttacttgtggagattgatgggttgagtgat
aacagccaggaccttttcattattggggctaccaataggcctgaccttcttgattctgcc
cttcttcgccctggtcggtttgacaagcttctttatgtcggtgtaaatactgatgcatca
tacagggaaaggatccttaaagcacagacgcgcaagtataagctccacaggaatgtttct
cttttgtcagttgctcagcgttgtccacctaactttactggtgctgatatttatgcgctg
tgtgcggatgcatggtttcacgcagcaaagcgatcagttaaaacatttgaaatcgatact
tcaagaagtaatgatgccagtgccgaagatgtcattgttgagatcgatgattttattaca
gttttaggagatatcgcaccatcactatctctggaggagctacaaaactacgaacagttg
aggcagaagattgaaggaccttctagatga
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