Miscanthus floridulus: 136495937
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Entry
136495937 CDS
T10264
Name
(RefSeq) uncharacterized protein
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
mflo Miscanthus floridulus
Pathway
mflo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
136495937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mflo04121
]
136495937
Enzymes [BR:
mflo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136495937
Ubiquitin system [BR:
mflo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
136495937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
zf-TRAF_2
Motif
Other DBs
NCBI-GeneID:
136495937
NCBI-ProteinID:
XP_066347809
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All DBs
Position
12:complement(57259272..57260104)
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AA seq
244 aa
AA seq
DB search
MGPTCQLRLKPPTITIARSGTYCAAPRKCDRATAFAHCGPELDLFVGDAKVSCPFKSYGC
GASLAYHTAAAHQDACACAPYHCAVPGCPFTATPPRLRDHLAVDHAWPLDTLPAYRKALP
LRVPVLASASSQPQPQQHHHRLLVKEGDEHSLFALSVCPCGAGAASCAVVSVSCVRTSVA
AEAGPRFTYMLWARSPAGIPASMPPGIAGRRLMMETDVASYAVPDGATVEDGMALYVPPP
MLSG
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgggtcccacgtgtcagcttcgtcttaaacctcccaccatcaccattgcgaggtcgggc
acctattgtgcggcgccccgcaagtgcgaccgcgccaccgccttcgcgcactgcgggcca
gagctcgacctgttcgtcggcgacgccaaggtgtcgtgcccgttcaagtcctacggctgt
ggtgcctccttggcgtaccacacggccgccgcgcaccaggacgcatgcgcctgcgcgccc
taccactgtgcggtgcccgggtgccccttcaccgctaccccgccgaggctccgcgaccac
ctcgccgtcgaccacgcctggcccctggacacgctcccggcctacaggaaggcgctcccg
ctccgcgtcccggtcttggcgtcggcgtcgtcgcagccgcaaccgcagcagcaccaccac
cgcctcctggtcaaggagggcgacgagcacagcctgttcgcgctgtccgtgtgcccgtgc
ggcgccggcgcggccagttgcgccgtcgtctcggtgtcatgcgttaggacaagcgtcgcc
gctgaggccggcccgcggttcacgtacatgctctgggcaaggtcgccggcgggcatccct
gctagcatgccccccggcatcgcgggccgccgcctgatgatggagacggacgtggccagc
tacgcggtgcccgacggggccaccgttgaggacgggatggcgttgtacgtgccgccgccg
atgctgagcgggtga
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