Miscanthus floridulus: 136496228
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Entry
136496228 CDS
T10264
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase Pin1-like
KO
K09578
peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:
5.2.1.8
]
Organism
mflo Miscanthus floridulus
Pathway
mflo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
136496228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mflo03021
]
136496228
03110 Chaperones and folding catalysts [BR:
mflo03110
]
136496228
Enzymes [BR:
mflo01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
136496228
Transcription machinery [BR:
mflo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
136496228
Chaperones and folding catalysts [BR:
mflo03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Parvulin
136496228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rotamase
Rotamase_3
Rotamase_2
X8
Motif
Other DBs
NCBI-GeneID:
136496228
NCBI-ProteinID:
XP_066348001
LinkDB
All DBs
Position
12:complement(79698844..79701531)
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AA seq
223 aa
AA seq
DB search
MSMPSCPPIHKPGASAAQNHQPTQSFLCCLPRRVATRAAKIGSESPAADGVGDAARKRPS
GSDGPTPAPADKRRRPEYPSSSSAGSLDRHQAHHHQPHGRRPPSSSAEEKVRASHILIKH
EGSRRKASWRDPEGLAISATTRDDAADLARALRDQIVSGDRKFEDIAAENSDCSSAKRGG
DLGSFGRGKMQKAFEKAAFALKVGEISDVVDTESGVHIIKRTG
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgcccagctgcccgcccattcacaagccaggtgcctctgcagcccaaaatcac
caaccaacccaaagctttctttgctgcctgccgcggcgcgtcgcaacccgggccgccaag
atagggtcggaaagccccgccgccgacggcgtcggcgacgcagcgcgcaagcggcccagc
ggcagcgatggccccaccccggcgcccgccgacaagcgccgccgcccggagtacccctcc
tcctcctccgcgggctcccttgaccgccaccaggcccaccaccaccaaccccacggccgc
cgcccgccgtcgtcctcggccgaggagaaggtgcgcgcctcccacatcctgatcaagcac
gagggctcccgccgcaaggcctcgtggcgggatcccgaaggcctggccatctcggccacg
acccgcgacgacgcggccgacctcgcgcgcgcgctccgcgaccagatcgtctccggggac
cgcaagttcgaggacatcgccgccgagaactccgactgcagctcggccaagcgcggcggt
gacctcggttcatttggaaggggtaagatgcagaaggcttttgagaaggctgcgttcgct
ctgaaggtgggggagataagtgacgtggttgatacagagagcggggtgcacatcatcaag
aggactggctga
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