Miscanthus floridulus: 136496453
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Entry
136496453 CDS
T10264
Name
(RefSeq) multiple RNA-binding domain-containing protein 1-like isoform X1
KO
K14787
multiple RNA-binding domain-containing protein 1
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mflo03009
]
136496453
Ribosome biogenesis [BR:
mflo03009
]
Eukaryotic type
90S particles
Other 90S particles
136496453
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_10
DUF8400
RRM_PARP14_3
RRM_5
RRM_occluded
RRM_Rrp7
Arm-DNA-bind_4
Motif
Other DBs
NCBI-GeneID:
136496453
NCBI-ProteinID:
XP_066348228
LinkDB
All DBs
Position
12:complement(71591632..71597093)
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AA seq
883 aa
AA seq
DB search
MSSRLCVKNLPKGADERRLREVFSRKGEVTDAKVIRTKDGKSRQFAFIGYRTNEEAEEAL
KYFNNTYIDTCKITCEVARKIGDPDAPRPWSRHSLKKPEYGSKDKNNAVAVDALPKGSKA
QGTSAHASGSKGSVANDPKFLEFLEAMQPRSKAKMWANDTAATLDTAAKDSIVATKESKG
PLKNVPASENDSSSEDTSDEEKANDSSSENASEKLQTENKQDKDMTDADFFKSKVKKNWS
DSESDDEGSGDQSGTTTDDEDSSDESEDADNQLADMKGYLDKKNIVDKDTLVENTDLQEM
EDLDNKESEDLDGRRRETEIREDQEKEDENGAPITDEKKLALETGRLYICNLPYATSEDD
LVELCRQYGDVEQAHIVVDRTTKLSTGRGYVLFCLPDSAVRALDELDNSSFQGRVLRVKA
AKPLNNNKLESSHETVVEKMSLKQKRLEQKKASEISGDTRAWNSFYMRQDTVVENIARKN
GISKSELLDREADDLAVRIALGETHVIAETKKFLSRSGVNVAALEELASKRNEKFKRSNH
VILVKNLPFNSAEEELAAMFQKHGSLDKIVLPPTRVFALVVFVEATEARHAFKKLLYTRY
KDTPLYLEWAPENILSATSAPVDEEEKNEVGERIVTKANIEQTVEGVSAEEIDPDRVESR
SVFVKNLNFKTTDESLKQHFSTNLKSGSLKSATVKKHVKKGKNVSMGFGFVEFDSVETAT
GVCKDLQGTVLDGHALILQLCNGKKDAQAAKKNGKDKSSTKLLVRNVAFEATEKDLRQLF
SPFGQIKSLRLPMKFGSHRGFAFVEYVTKQEAQNALQALASTHLYGRHLVIERAKEGETL
EELRARTAAQFVDEHSGFQSLSRKRKQSSLVDEGSVKISRIVE
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgcggctgtgcgtgaagaacctgcccaagggcgccgacgagaggcgccttcgg
gaggtgttctcgcggaagggcgaggtcaccgacgccaaggtcatccgaacaaaggatggc
aagagtcggcaatttgcattcattggttacagaaccaatgaagaggcagaggaggcactc
aagtatttcaacaatacatacattgacacttgtaagatcacctgcgaggttgcccgaaag
attggtgaccctgatgctcctcgcccttggagccgccactctttaaaaaagcccgaatat
ggtagtaaagacaagaataatgctgtagctgttgatgcactgccaaaaggttccaaggcc
caaggaacatcggcccatgctagtggttctaaaggcagtgtagctaatgatcccaagttc
ctagagtttcttgaggcaatgcagccccgttctaaagccaagatgtgggcaaatgataca
gctgctactcttgacaccgctgcaaaagatagcatagtagccactaaagaatctaaggga
cctctcaaaaatgttccggcctctgagaatgattcatcttctgaagacacttctgatgag
gaaaaggcaaatgattcgtcttctgaaaatgcttcggagaaactacagacagagaataaa
caagacaaggatatgactgatgcagatttcttcaagagtaaagtgaagaaaaattggtca
gattctgaatcagatgatgaaggttctggtgaccagtcaggtaccaccactgatgatgaa
gactcgtcagatgaatcagaagatgctgataaccagttggcggatatgaagggctatctg
gacaagaaaaacattgtggacaaggacactcttgtggagaatactgacttgcaagagatg
gaagatcttgacaacaaagagagtgaagatcttgatggcagacgaagagaaactgaaatt
cgtgaagatcaagaaaaggaagatgaaaatggtgctccaattactgatgaaaagaagttg
gccctggagactggccgtctatatatctgcaaccttccatatgcaaccagtgaagatgat
ttagtggagctgtgccgccaatatggtgatgtggaacaggcacatattgttgtcgataga
accacaaagctctcaacaggtagaggctatgtgcttttttgccttccggactcagcagtc
agggcacttgatgaactagataactcaagcttccagggccgagtgttacgtgttaaggct
gctaaaccgctaaataataataagttggagtctagtcatgaaactgttgtggagaaaatg
agtctcaagcagaaaaggttggaacaaaagaaagcttctgagatcagtggggatacgaga
gcatggaacagcttttatatgcgtcaagatactgttgttgaaaacattgcaaggaagaat
ggtatcagtaagagtgagttacttgatagagaagcggatgaccttgccgttcgtattgct
cttggtgagacacacgtcattgcagagactaagaaatttctatcaaggtctggagttaat
gttgctgcattggaagaacttgcttctaaaagaaatgagaagttcaaaagaagcaatcat
gtgatattagtaaagaacttgccatttaattctgctgaggaagaacttgcggcaatgttt
cagaaacatggtagtttggataaaatcgttctacctccaacaagagtatttgccttggta
gtctttgttgaagcaactgaagcccgacacgcattcaaaaaattactatatacacgatac
aaggatactcctctgtatttggagtgggcacctgaaaacatattatctgctacctcagct
ccggtggatgaggaagaaaagaatgaagttggtgagcgtattgttactaaagctaatata
gagcaaacagtcgaaggagtaagcgccgaagagattgatccagatagggtggagtcacga
tctgtgtttgtcaagaacttaaatttcaagacaacagatgaatcgttgaagcagcatttt
agtacaaatctaaagagtggcagtcttaaaagtgcaacggtgaagaagcatgttaagaag
ggcaagaatgtttcaatgggatttggtttcgttgagtttgactctgttgaaactgcaact
ggtgtgtgcaaggatctacagggaacagttctggatggacatgctttgatcttgcaactg
tgtaatgggaagaaagatgctcaagctgcaaagaagaatggcaaggataaaagttcaaca
aaactgcttgtgcgtaatgtagcatttgaagcaactgagaaggacttgaggcagttattt
agtccgtttggccagatcaaaagcctcaggttgcctatgaagtttggaagccacagaggt
tttgcatttgttgaatatgtcacaaaacaagaggcccagaatgctctacaagccctcgca
agcactcatctttatggtcgccacctggtgattgagcgagcaaaggaaggagagactctt
gaggaactgcgagcaagaactgccgcacagtttgtggacgaacacagcggtttccagagc
ttgtccaggaagaggaaacagagcagtcttgtggacgaaggctctgttaaaatttcaaga
atagtagagtga
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