Miscanthus floridulus: 136496680
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Entry
136496680 CDS
T10264
Name
(RefSeq) poly(A)-specific ribonuclease PARN-like isoform X1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
mflo Miscanthus floridulus
Pathway
mflo03018
RNA degradation
Brite
Enzymes [BR:
mflo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
136496680
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
136496680
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136496680
NCBI-ProteinID:
XP_066348512
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Position
12:complement(51414035..51419029)
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AA seq
718 aa
AA seq
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MQVQGLLRAPPPRILLYRAISSPPPGGNGGGGGGVAVKQVTRGNMAEALEKLRGRVREAA
FVGVDLEMSGVTSAPWRDTFELDRADVRYLKLRDSAERFAALQLGVCPFRWDPAKSAFVA
HPIPFSSCRHNFYIFPRKELPSDCSSHEFLCQTTSIDFLAKYQFDFNTCFREGVSYLSRA
QEEEALQKFNMLYHGQTATSSTNSEEDRDIPLKSASDILFTERMKMNFKEWRDVIVSKPM
VDNHLLGNIKFCAGQFQTVFFKMRPAIMLNGFSSHQLKLIQQVLRKNFRDLVFVCTFGED
DTSEKKVVYSGTDEDRILLMKDVQEDLLKNREERVKSAIGIRHVIDLLSSERKLIVGHSC
FLDIAQVYSKFVGPLPSSIKEFALSFHKIFPHIADTRHLMSVNQAVQKLMKHKSKSLSSA
FSLLCPASYSSAEKPSSHSPVTIEVEGDETTSSCFISGAKHEAGYDAYMTGCIFAQLCAY
LGIKFEQFSPLDNLATNTELQKHINFLSPSWNSGTVIDLSTGMERPEPGYMRRYPAAVYD
NIIVIWGFPSKVRPKEIKDCICKVFGSGSVTTVFSIDSTAALVQFKKQESVNDFLDLKAV
LERADSAISILHPLSTILEGGQTRAVKYDTYRDICSSSESKSLFADQAEAVCATLKNQLK
ENVDDNLISGVLDGVALASVTEGDGIISGSNNQDVADVTCHDILDALHDGKALLGRRM
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgcagggcctcctccgggcgccgccgcccagaatcctactctaccgcgcgatc
tcctccccgccgcccggaggcaacggcggtggcggtggcggggtggcggtgaagcaggtg
acgcgggggaacatggcggaggccctggagaagctgcggggacgcgtgcgggaggccgca
ttcgtgggggtggacctggagatgagcggcgtcacgagcgcgccctggagagacaccttc
gagctcgaccgcgccgacgtgcgctacctcaaactccgcgactccgcggagcggttcgcc
gccctacagctcggcgtctgccccttccgatgggaccctgccaaatccgccttcgttgcg
cacccaatccctttttcttcttgcaggcataacttctatatcttccctcgcaaggagctc
cctagtgattgttcatctcatgaatttctttgtcagacaacttcaattgacttcctagca
aagtaccagtttgatttcaacacatgcttccgtgaaggagtatcttatctatccagagca
caagaggaagaagcgctacagaaatttaatatgttgtatcatggtcaaacagctacatct
tccaccaattctgaagaggacagagacatacctttaaaaagtgcttctgatattcttttc
acagaaaggatgaaaatgaacttcaaggaatggcgtgatgtgatagtcagcaagccaatg
gttgacaaccatttgttaggaaacattaaattttgtgcaggacaattccagacagttttc
ttcaaaatgcgcccagctattatgcttaatggattctcatcgcatcaactgaagttaatt
caacaggttttgagaaaaaactttagggatcttgtttttgtctgtacatttggtgaggat
gacacatctgaaaagaaagtagtttattcaggcactgatgaggacagaatattattaatg
aaagatgtgcaggaagatctactaaaaaacagggaagaaagagttaaatcagcaataggc
atccgccatgtcatcgaccttctttcatcagaaaggaaattgattgttggacatagttgt
ttcctagatattgcacaagtgtacagcaagtttgtaggtcctcttccatcatctatcaag
gaatttgcgttaagtttccacaaaattttcccacatattgcagataccaggcatcttatg
tctgtcaatcaagcagttcagaaactgatgaagcataaaagcaaatcactatcttcagct
ttctcattgttgtgccctgcatcttattcatctgctgagaagccatcaagtcattctcct
gtgacaattgaagttgaaggagatgaaacgacgtcttcttgcttcatttcaggtgccaag
catgaagctgggtatgatgcatacatgactggatgtatttttgcgcagttgtgcgcttat
cttggcataaaatttgagcagttctcacctctggataacctagcaacgaacactgagctg
cagaaacacatcaattttttgtcccctagctggaacagtgggacagtgattgatttgagc
actggcatggagagaccagaaccaggttatatgagaaggtaccctgctgctgtgtatgat
aacatcattgtcatctggggattcccgtctaaggttagaccaaaggaaattaaggattgc
atctgcaaagtatttggttcaggttcggttacaaccgtcttctccattgattccactgct
gcccttgtgcagttcaagaaacaagagtccgtaaacgatttcttggatttgaaggctgtt
ttggagagggcagatagtgctatctcaattctacaccccctgtcaactattttggaagga
ggccaaacacgagctgtaaagtatgatacctacagagacatctgcagctcttctgaatca
aaatctctctttgctgatcaagctgaagcagtttgtgctactttaaagaatcaactcaaa
gaaaatgtcgatgacaatcttatatctggtgttcttgatggagttgcactcgcctctgta
actgagggagatggaataatatcgggttccaataatcaagacgttgctgatgtaacatgt
cacgatatcttagatgctctacacgatggcaaagcattgttgggcagacgaatgtga
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