Miscanthus floridulus: 136496728
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Entry
136496728 CDS
T10264
Name
(RefSeq) uncharacterized protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
mflo Miscanthus floridulus
Pathway
mflo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
136496728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136496728
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
136496728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Zn_ribbon_RanBP
Vps36-NZF-N
G-alpha
Stc1
Motif
Other DBs
NCBI-GeneID:
136496728
NCBI-ProteinID:
XP_066348576
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Position
12:complement(81644480..81649833)
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AA seq
691 aa
AA seq
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MFVPVLDNRSGFEEPFKISGMWQCSICTHVNTTDNLSCELCGVLRDLSLYFNNISEAEDG
AKCRHKYSGVSVLARSLFTPSSTNSKAIVFSDGFEDSRNTTGNKQATMDALHKTYMTRKK
RHIYIVPFKFDTPSPDDMVITGLKSSRNFRKVDTEVLVKDSVDVTGKEMTDNDILLTEKS
TSMDPSASVQLDEVGGTTSNVPSSSQNITLVLDHKLQHLSLERKPKNSKPNIKKAASVSH
YKPEPWMLQSEDQEIRKQLSLAIVGHVDSGKSTLCGRLRHALGLISKKQMHKYEKEAKEK
GKGSFAYAWAMDESSDERERGITMTVAVAYFNSENYRVVLLDSPGHKDFVPNMISGATQA
DAAILVVDASIGSFEAGMGVNGIGQTKEHSQLIRSFGVENLIVAINKMDVVEYSKERFQS
IKLQLGIFLRSCGYKDSSVTWVPLSAMANENLVTASSDSRLLSWYNGDCLLKAIDSLPPP
HRDVSRPLRLPICDVIASHTLGQVAVCGKVESGGIRTGSKVLAMPSGDIATVRTIERDSS
TCNLARAGDNVAIGLHGIDPGHIVSGGVLCHPDFPVHIASHLELKILVLEITMPILVGLQ
FELHIHHARVSARLVKILSSLDQKTGKALKEMPRLLTARQAAVVEVKLDREVCAEEFSTL
KALGRVFLRSQGNTVAVGIVTRILDQAFDLA
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttcccgtgctagataacagatctggttttgaggagccctttaaaatttctggg
atgtggcaatgctccatttgcacgcatgtaaatactacagataatttatcttgtgagcta
tgtggtgtacttcgtgatctctcactgtatttcaataatatcagtgaagccgaagatgga
gctaaatgcagacacaagtattctggagtatccgtactcgcaagatctctttttacacca
tctagtacaaattcaaaggctattgttttctctgatggttttgaagacagtagaaataca
acagggaataagcaagctaccatggatgctctacataagacatacatgactcgcaaaaag
cgccacatttacatagtgcctttcaagtttgatacaccatctccagatgacatggtcatt
acaggcttaaaatcatccagaaactttagaaaagttgacacagaggttctagttaaagat
tctgttgacgtgaccggaaaggagatgacggataatgatattcttctaactgaaaagagt
acaagcatggacccaagtgcatcagtacaattggatgaagttggtggaactactagcaat
gttccttcgagtagtcaaaatataactcttgttttggaccataagctacagcatttgagt
ttggagaggaaaccgaagaacagtaaacccaatattaagaaagcagcttctgtttcacac
tacaagccagaaccatggatgctccagagtgaagatcaagaaatccgtaaacagctaagt
cttgccattgttggtcatgttgattctgggaaatcaactttatgtggtcgattacgacat
gctttgggattgatttcaaaaaaacaaatgcataaatatgagaaagaagctaaagaaaag
gggaaagggtcgtttgcatatgcctgggctatggatgagagcagtgatgagagggagcgc
ggcattacaatgactgtggctgtagcatacttcaatagcgaaaactaccgtgtggttttg
cttgactcccctggtcacaaggattttgttcctaatatgatatctggtgctacacaagct
gatgcagccatcctagttgttgatgcatctataggctcatttgaagctggcatgggtgtt
aatggaattggtcagacaaaggaacactcacaacttattaggagctttggtgttgagaac
ttgatagttgctattaataagatggatgtggtggaatattcgaaggagcggtttcagtcc
attaaattgcaacttggtatctttcttcgatcatgtggttacaaagactcttcagttacc
tgggttcctttgagtgcaatggcaaatgaaaatttagtcacagcttcttcagattctcgt
cttctatcatggtacaatggagattgtctgctgaaagccattgactcattacctcctccc
catcgtgacgtttcaaggccactgcgccttccaatatgtgatgttattgcatctcacacg
ctgggtcaggtggctgtttgtggtaaagtagagtctggagggatccgaactggctctaag
gttcttgccatgccttctggagatatagctacagtaagaaccattgagcgggattcctct
acttgcaacttggctagagccggggacaacgttgccattggtttgcatgggatcgaccct
ggccatattgtgtcaggtggagttctttgccatccagatttccccgtgcacatcgcttct
cacttggagctgaaaattctggttctagaaatcaccatgccaatactggttggtcttcag
tttgagctgcacatacatcacgcgagggtgtcagcgaggttggttaaaatactgtcgtcg
ttggaccagaagactggcaaggccttaaaggaaatgccacgtttgctcaccgcgaggcag
gccgccgtggttgaagtgaagctggacagagaagtgtgtgcggaggaattctcgacgctg
aaggcccttggacgggtgttcctgcggtctcagggtaacactgttgcggtgggcattgtg
actcgaattctggatcaggcttttgacctcgcctaa
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