Miscanthus floridulus: 136496794
Help
Entry
136496794 CDS
T10264
Name
(RefSeq) putative tRNA pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mflo03016
]
136496794
Enzymes [BR:
mflo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
136496794
Transfer RNA biogenesis [BR:
mflo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
136496794
Prokaryotic type
136496794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
136496794
NCBI-ProteinID:
XP_066348650
LinkDB
All DBs
Position
1:144516689..144521112
Genome browser
AA seq
517 aa
AA seq
DB search
MAAAAAASASWLLRRSISSAFLARRAGPSILRTTLCYSSSASACPKLTPSLPPPDTSDND
GGGGMRWESARKKRVVLRIGYVGTDYRGLQKQRELGVDSTIESVLESAIFKSGGILESNY
GKLQKVGWERSSRTDKGVHSLATMISLKMEIPDRAWEDDPDGIALASIINSNLPDNVRVF
SILPAQRSFDVRRECLYREYFYLLPAEVIGIKDGYSPEEMQEHLSEFNSILKGFEGNHPF
HNYTARAKYRKVLAGRHRRVKGASSMLKSMSSEMGMAESSSEESTSSDHDEDLNISSIID
TGASEDNCVNDILKLSENRVQIQARWLHEPDESDRLNASHFRDIITCSCGELQTSSGIQF
VELTLCGVSFMLHQIRKMVGTAVAVKRGLLPKDIIELSLAKFSRIVLPVAPSEVLILKDN
SFCTKSKEGRIVRPGIQSMNKSAAIRKGVEEFYKAALLPEVAKFLGPSMPPWKEWLENLD
RFAGIPDSQLDEVREAYRAWKADYDRVKMARKSASSV
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgccgccgctgcgtcggcgtcgtggcttctccgtaggtctatatcctccgca
ttcctcgccaggcgcgcgggccctagcatcctgcgtacaaccctctgctattcctcctcc
gcatccgcctgccccaagctaacgccgtcactgcctccgccggacacatccgacaatgat
ggcggcggcgggatgaggtgggagtctgcgcgcaagaagagggtggtgctccgcatcggc
tacgtaggcacggattaccgagggcttcaaaagcagcgagagcttggcgtggattcgacc
attgagtcagtcttggaatctgccatcttcaagtcaggcggaattcttgagagtaattat
ggaaaactgcaaaaggttgggtgggaaaggagtagccgaactgataaaggggtacactca
ttggctacaatgatttcccttaaaatggaaatccctgatagagcatgggaggatgatcct
gatggtattgctcttgccagtatcatcaactcaaatttgccggacaatgtgagggtattt
agtatcttgcctgcgcaaaggagttttgatgtaaggagggagtgcttgtaccgtgagtac
ttctatcttcttcctgctgaagttattggaattaaagatggttatagccctgaagaaatg
caagagcacttgtctgagttcaacagcatactgaaaggtttcgagggaaaccatccattt
cataattacacagcacgtgccaagtataggaaggtcctcgcgggaagacaccgaagggtg
aaaggagcaagctcgatgttgaagtccatgtcctccgaaatgggtatggcagaaagctct
tctgaagaaagcacttcttcagatcatgatgaggacttgaatatttcatcaatcattgac
actggtgcatcagaggacaattgtgtgaatgatattctgaaactttctgagaatcgggtg
cagattcaagctaggtggctgcatgaacctgatgaaagtgatagattaaatgcttcacat
ttcagagatatcattacctgttcctgtggagagttgcaaacttcatcaggaattcaattt
gtggaattgaccttatgcggggtatcttttatgctacatcagatccggaaaatggttgga
actgccgtggcagtgaagcgtggattactacccaaagacatcatagaactgtctcttgca
aagttttctagaatcgtgctaccagtagccccttcagaagttctgatccttaaggacaat
agtttctgcacgaagagcaaggaagggagaatcgttcgccctgggatccagtcaatgaac
aagtcagcagcaatcaggaagggcgttgaggaattctacaaggcggctcttctgccagaa
gtagcgaaattcttgggcccctctatgccgccatggaaagaatggctggagaacttggac
aggtttgctggcataccagattcacagctggacgaagttagggaggcctacagagcatgg
aaggctgattatgaccgcgtgaagatggctagaaagagtgctagcagtgtctaa
DBGET
integrated database retrieval system
