Miscanthus floridulus: 136496879
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Entry
136496879 CDS
T10264
Name
(RefSeq) chaperone protein ClpC1, chloroplastic-like isoform X1
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
mflo03110
]
136496879
Chaperones and folding catalysts [BR:
mflo03110
]
Heat shock proteins
HSP100
136496879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
Sigma54_activat
UVR
AAA_22
nSTAND3
NBD_SMAX1
AAA_18
TniB
AAA_14
NACHT
AAA_28
Zeta_toxin
IstB_IS21
AAA_25
Torsin
DNA_pol3_delta2
Pro_racemase
DAHP_snth_FXD
Motif
Other DBs
NCBI-GeneID:
136496879
NCBI-ProteinID:
XP_066348748
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All DBs
Position
12:complement(36795765..36802950)
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AA seq
945 aa
AA seq
DB search
MERTLVQSRIVPATLHRSGSGRSRVRARATMFNNMPTRTLTLGGFQGLRQTNFLDTRSVI
KRDFVSTVASQMSRPRGSASRGVVRVMFERYTEKAIKVIMLAQEEARRLGHNFVGTEQML
LGLIGEGTGIAAKVLKSVGMNLRVARVEVEKIIGRGSGSSVPLNIPFTPRAKRVLELTAE
EARQLGHNYIGSEHLLLGLLREGQGVAARVLEILGADPNNIRTQVIRMVGESTEAVGAGV
GGGSSGQKMPTLEEYGTNLTKLAEEGRLDPVVGRQDQIERVTQILGRRTKNNPCLIGEPG
VGKTAVAEGLAQRIANGDVPETIEGKKVITLDIWLLVAGTKYRGEFEERLKKLMEEIKQN
EDIILFIDEVHTLIGAGAADGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPALE
RRFQPVKVPEPTVDETIQILRGLREGYELHHKLRYTDEGLVAAAQLSYQYISDRFLPDKA
IDLIDEAGSRVRLRHAQVLPVNWSDGTVRLVALFLSEHFLSMLQLPDEAKELDKELRQIT
KQKNEAVRGQDFEKAGELRDREMELKTQITAIIDKSKEMIKAETESGEVGPLVTEADIQH
IVSSWTGIPVEKVSSDESDRLLKMEETLHTRIIGQDEAVKAISRAIRRARVGLRNPNRPI
ASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTE
GGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTS
NVGSSVIENGGHKIGFGLDYDEDTSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTK
LEVKEIADIMLKEVFDRLKAKGIDLQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDS
LAEKMLAGEVKEGDSAIVDVDSEGKVVVLNGGSGVAEPLVPALPV
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggagaggactctagttcagtctaggattgttcctgccacattacacaggagcggatct
ggtcgatctcgtgtgcgtgcgagggccacaatgttcaataacatgccgacacggaccctt
actcttggtggctttcaagggctgcggcagacaaactttttggacaccaggtctgtgata
aagcgtgactttgtatctactgtagcaagtcagatgtcgcggccacggggttcagcatca
agaggggtggttcgggtcatgttcgaacgctacactgagaaggccatcaaggtaattatg
cttgcgcaggaggaggccagacgtcttggccacaattttgttgggacagagcagatgtta
ctagggcttattggtgaggggactgggattgcagcaaaggttttgaaatctgtgggaatg
aatcttagggttgcccgagtggaagttgagaagattattggacgaggtagtgggtcgtcc
gtgcctcttaacatcccattcacaccccgtgccaagcgtgtattggaactgacagctgaa
gaagctcgccagctagggcacaactatataggatctgagcacttactcctgggcctactt
cgtgagggtcaaggtgtggcagcccgtgtgcttgaaatccttggtgctgatccaaataac
attcgtacccaggtcataagaatggttggtgaaagcacagaagctgttggtgctggtgtt
ggaggaggaagcagtggccagaagatgccaacacttgaagaatatggtactaatttgaca
aaattggcagaagagggaagactcgacccagttgttggcagacaggaccagattgaacgt
gtaacccaaattttgggcaggcgaacgaaaaacaacccctgcctaatcggagagcctggt
gttggcaagactgctgttgcagaggggcttgcacagcgtatcgcaaatggggatgttcca
gaaacgattgaaggaaagaaggttattactcttgacatctggctccttgtggctggtacc
aagtaccgtggagagttcgaagaaagattgaagaagcttatggaagaaatcaagcaaaat
gaagatattattctctttattgatgaagtgcacacactgattggagcaggtgcagctgac
ggtgcaattgatgctgctaacatcttgaaaccagctcttgctagaggtgaactgcagtgt
attggtgccacaactctggatgagtataggaagcacattgagaaagatcctgcattggag
agaagattccagccagttaaagttccagagccaactgttgatgaaaccatacagatctta
agaggacttcgtgagggatatgaactccatcataagctgcgatacacagatgaaggtcta
gttgctgcagcacagttgtcctatcaatatatcagtgaccgcttcctgcctgataaagct
attgacttgattgatgaagctggatcccgtgttaggctgaggcatgcgcaggtactacca
gtgaattggtcagatggaactgtacggttagttgcattgttcttatctgaacatttcctg
tctatgttacagttgcctgatgaagccaaagagctggacaaagagctcaggcagataacc
aagcagaagaatgaggctgtacgtggccaagatttcgagaaggcaggggaactaagggac
cgtgaaatggagcttaagacccaaattactgctattattgacaagagtaaggaaatgatt
aaagcagagactgaatctggcgaagttggccctcttgttacagaggcagacattcaacat
attgtctcctcttggactggaataccagtggagaaagtctcatctgacgagtctgaccgt
ctccttaagatggaagaaacactgcatacacgtatcattggccaggatgaagccgtcaaa
gccattagccgtgctatccgccgtgctcgtgttggcctcaggaatccaaatcgaccaatt
gctagcttcatattctctggaccgactggtgttggcaagtcagaattagcaaaagctcta
gcagcctactactttggctcagaggaagccatgatcaggcttgacatgagtgagttcatg
gagagacatactgtctccaagctcatcgggtcacctccaggttatgttggctacactgag
ggtggccaacttactgaagctgttcgtcgccgtccatacacggttgttctctttgatgag
attgaaaaggcacatccagatgtattcaatatgatgcttcagatcttggaagacggcaga
ctaactgacagtaaggggaggacagttgatttcaagaacaccctgctgattatgacatcg
aatgttggaagcagtgtcatcgagaacggaggccacaagattgggtttggccttgattat
gacgaggacacaagctacaacaggatcaagagcctagtgactgaagagttgaagcagtac
ttccggccagaattccttaacagattggatgagatgattgtgttccggcaactgacaaag
ttggaggtgaaagagattgctgatatcatgctgaaagaagtatttgataggctgaaggca
aagggcattgatctccaggtcacggagaggttccgggatagggttgttgatgaaggttac
aacccgagctatggtgccaggcctctgcggcgtgctatcatgaggctcttggaagatagt
ctggcggagaagatgctggctggcgaggtgaaagaaggtgactctgccattgttgatgtg
gattcagaaggcaaggtagtagtcctgaacggtggtagtggtgttgctgagccactcgta
cctgctctcccagtgtag
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