Miscanthus floridulus: 136497013
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Entry
136497013 CDS
T10264
Name
(RefSeq) F-box protein SKP2A-like
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
mflo Miscanthus floridulus
Pathway
mflo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
136497013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mflo04121
]
136497013
Ubiquitin system [BR:
mflo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
136497013
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Motif
Pfam:
LRR_6
LRR_At5g56370
LRR_4
F-box-like
LRR_14
F-box
LRR_8
Motif
Other DBs
NCBI-GeneID:
136497013
NCBI-ProteinID:
XP_066348894
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Position
12:complement(82552963..82556554)
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AA seq
382 aa
AA seq
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MDSAQPPSGELNTSFNTLMVAGGDQSQQPQDAGNETSFTNWKDLPMELLLRIISLVGDDR
IVIVASGVCTGWRDTLGWGVANLSLSWCQGHMNDLVISLAHKFTKLQVLSLRQIRAQLED
SGVEAVANNCHDLRELDLSRSFRLSDRSLYALAHGCPHLTRLNISGCSNFSDAALVFLSS
QCKNLKCLNLCGCVRAASDRALQAIACNCGQLQSLNLGWCDSITDKGVTSLASGCPELRA
VDLCGCVLITDESVVALANGCPHLRSLGLYYCQNITDRAMYSLAANSRMRSQGGGWDATA
KSGGGGGNDRERDGLASLNISQCTALTPPAVQAVCDSFPALHTCPERHSLIISGCLSLTS
VHCACALHPHRAGRVILSNHAY
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggatagtgcacagccaccgagtggggaattgaacacttcgttcaatactctaatggtt
gctggaggtgaccagagtcaacagcctcaggatgctggcaatgaaaccagcttcacgaac
tggaaagaccttcccatggagctactcctgcgtatcatttcactagttggagatgacagg
atagtcattgtggcctccggtgtatgcacaggatggcgtgacacattagggtggggagtt
gcaaatctttcactatcatggtgccagggccacatgaatgacttggtgatatcactggct
cacaaattcacgaagctgcaagttctatctctacgccaaatcagagctcagctagaagac
agtggcgtggaggccgtggcaaacaactgccatgatttacgcgagctggatcttagcaga
agctttaggctcagcgaccggtccttgtacgctctggcgcatgggtgccctcaccttaca
aggctcaacatcagtgggtgctccaatttcagtgatgcggctctcgtgttcctctctagc
cagtgcaagaacctgaaatgcttgaacctgtgcgggtgtgtgagggcagcttctgacaga
gcactacaggccattgcttgtaactgtggccagctgcaatcgttgaacttgggctggtgt
gatagcatcactgacaagggagtgaccagcttggcttcaggatgccctgagctcagggct
gtggacttgtgcggttgtgttcttataacagatgagagcgtggttgcgctggcgaacggc
tgccctcacctgcgttccctgggcctgtactactgccagaacatcactgaccgcgccatg
tactccctggccgccaacagccgcatgcggagccagggcgggggctgggacgcgacagcg
aaaagcggcggcggcggcggcaatgaccgggagcgggacgggctggcgagcctgaacatc
agccagtgcacggcgctgaccccgcccgcagtgcaggcagtgtgcgactcgttcccggcg
ctgcacacgtgcccggagaggcactcgctcatcatcagcgggtgcctcagtctcacttcc
gtgcactgcgcctgcgcgctgcaccctcaccgagccgggcgcgtcatcctctccaaccac
gcctactga
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