Miscanthus floridulus: 136497019
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Entry
136497019 CDS
T10264
Name
(RefSeq) protein CHROMATIN REMODELING 19-like isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mflo03036
]
136497019
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
136497019
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DUF3246
DEAD
Motif
Other DBs
NCBI-GeneID:
136497019
NCBI-ProteinID:
XP_066348898
LinkDB
All DBs
Position
12:65227325..65241220
Genome browser
AA seq
979 aa
AA seq
DB search
MHRGFEEISDDEWSNRTFEPSRVLKRPNQRPSQPPPPIDSFAYNPKACSAAGTGTATVVL
SDDDSDFDLGADGGSRRAANSQRVLKRPHNGPPSRPSPPVKSLRRNPQPSNAAAAFGVSD
SEDDDFVLTDDDFDRPTSPLRTSSLRRKGKSQRPLKGPQLKPHSRAPPPVNSFSHNPKRS
KFAADVGLSNSEDDEFDLTETSSLHRSAKRQHGQKRSQHKPHLQDPQSFGSSRRNPKPSK
AAATTGLSDSDDDDFDTTDNEFDLPASPSRTSRPRRTTSRRLTSFAIDISEEDEEDLADD
DFDYQDPRPHQQRPSGRHFVIGDDDDSDVPVAVEDDDGVNWSELEKEDEDEGYNGERSVN
VEEPEGDVVGMALRKCSRISSDLRKELFGSSARDCESYAEIDASTCRIVTQEDVNAACTS
EKSGFEPVLKPYQLVGVNFLLLLHRKSIGGAILADEMGLGKTVQAVTYLTLLWHLYNDPG
PHLIVCPASVLENWDRELRKWCPSFSIIMFHGAARTTYSKELSSLGKAGCPAPFNVLLVG
YSLFERRSAQQKDDRRALKRWQWSCVLMDEAHVLKDKGSFRWRNLMAVAQHARQRLMLTG
TPLQNDLHELWSLLEFMMPDIFAIGDVDLKKLLNAEDRELISRIKSILGPFILRRLKSDV
MQQLVPKIQHVKFVVLGTEQSKAYKNAIDEYRAACEARSSKFSDDISNNIAGLIPKRQIS
NYFTQFRKIANHPLLIRRIYSDKDVDRIAQLLYPKGAFGFECSLERAIQELKNYNDFDIH
QLLLSYGDVGTKGALTDEHVFASAKCQALGELLPSLANDGHRVLIFSQWTTMLDILEWAL
EVIGVTYRRLDGGTAVTERQTIVDTFNNDLSIFACLLSTRAGGQGLNLVGADTVIIHDMD
FNPQMDRQAEDRCHRIGQQKPVTIYRLVTKESVDEKIYEIARRKLVLDAAILHSGAELDN
STDVPEKTMGEILASLLLV
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgcggcttcgaggagatctccgacgacgagtggtctaatcgcaccttcgagcct
tcgcgcgtcctcaagcgccccaaccagcggccctcgcagcctccgccgccgatcgattca
ttcgcctacaaccccaaggcttgctccgccgccggcaccggcaccgcaactgtcgtcctc
tcggacgacgacagcgacttcgacctaggcgcggacgggggttcccgccgcgccgcgaac
agccagcgcgtcctcaagcgcccgcataacggccccccttcgcggccttctccgccagtt
aaatcgctccgccgcaatccccaaccctccaatgccgctgccgcctttggggtctccgac
agcgaggacgatgacttcgtcctcacagacgatgacttcgatcgtcctacgtcgcctctg
aggacgtcaagccttcgccgcaaagggaagagccaacgccccctcaagggtcctcagctc
aagccccattcgcgggctcctccgccagttaactctttcagccataatcccaaacggtcc
aaattcgccgctgatgtggggctttccaacagcgaggacgacgaattcgacctcacagaa
acgtcaagcctccaccgcagcgcaaagagacaacacggccagaagcgttcacagcacaag
ccccatttgcaggatcctcagtcctttggctcgtctcgccgcaatccgaaaccttccaag
gctgctgccaccacagggctatctgacagtgatgatgatgacttcgacaccacggacaat
gagtttgaccttccagcttcgccctcgaggacatcgcgcccacgccgcactaccagtcgc
cggttgacgagttttgccattgacatctctgaggaagacgaagaagaccttgctgatgat
gactttgactaccaagacccaaggcctcaccagcaacgtccctctggccgccactttgtg
atcggggacgatgatgacagtgatgtgcctgtagctgtggaggatgatgatggggtgaat
tggtcggagctggagaaggaggacgaagatgagggctacaatggggagagaagtgtaaac
gtggaggagcccgagggagatgtggtgggaatggcattgcgcaagtgttcacgcatctcg
tcagatctgcgcaaggagctttttggttcatcagcgcgggattgtgaaagctacgccgag
atagacgcttccacttgccgtattgttactcaggaagacgtaaatgctgcatgcacaagt
gagaagtcagggtttgagcctgtgctgaagccgtatcaacttgtgggcgtcaatttcctt
ctcctattgcatcggaaaagcattggcggagcaattttggctgatgaaatgggtcttggg
aagacagtgcaggctgtcacttatcttactctattatggcatctatataacgacccagga
ccacatctgatagtttgcccagcttccgtgttggagaattgggacagagaactcaggaag
tggtgcccttcgttttctatcatcatgtttcatggagctgcaaggactacctactcaaag
gaattaagctccttaggcaaggctggctgtccagctccatttaatgtcctccttgttggc
tactcactttttgaaagacggagtgctcagcaaaaggatgatcgtagggccctcaaaaga
tggcaatggagctgtgttttgatggatgaagcgcatgttctgaaagataagggtagcttc
cgatggagaaacctgatggctgttgcgcaacatgctcgccaaaggctaatgctgacagga
actcctctccaaaatgatttgcatgagttatggtcattattggaattcatgatgcctgat
atatttgccatcggagatgttgatctgaagaagctgctgaatgcagaagaccgcgaacta
atttcacgcataaagtccattttagggccatttattcttagacgattgaagtcagatgta
atgcagcagcttgttcctaaaatacaacatgttaagtttgtcgtcttgggcacagagcag
tctaaagcttacaaaaatgccatagatgagtaccgcgctgcttgcgaggctcgtagttcc
aagttttcagacgacatttccaataatattgctggattgattccaaagcgtcaaatatcg
aactattttacacagtttcgcaagattgcgaatcaccctttgcttataaggcgtatttat
agtgacaaagatgttgatcgaattgcacagttgctgtaccctaaaggtgcatttggcttc
gaatgttccttggagagagcaatccaagagctaaagaactacaatgattttgatatccac
caactattattgtcatatggtgatgtgggcacaaagggtgctctaacagatgagcatgtt
tttgcatcagcaaaatgtcaggctttaggggagcttttaccttctctagcaaatgatggt
cacagagtactcatatttagtcagtggaccacaatgcttgatatccttgaatgggcactg
gaagtaataggagttacatatagacgccttgatggagggaccgctgtaacagaaaggcag
actatagtggacacgttcaacaacgatctttctatatttgcgtgtttactttctacaaga
gctggaggccaggggctgaaccttgtaggagctgacacagtcattatacatgatatggat
tttaacccccagatggatcggcaagccgaggaccgttgccatcgcattggacaacagaaa
cctgtcactatctataggctagtgacaaaggagtcagttgatgaaaaaatctatgagatt
gcaaggcggaagctagtactagacgccgcaattcttcattctggagcagagttggacaat
agtaccgatgtaccagagaagacaatgggagagattttggcatctcttctcctggtctga
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