Miscanthus floridulus: 136497024
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Entry
136497024 CDS
T10264
Name
(RefSeq) protein argonaute 1B-like isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136497024
03036 Chromosome and associated proteins [BR:
mflo03036
]
136497024
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
136497024
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
136497024
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
136497024
microRNA pathway
RISC loading complex
136497024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
Gly-rich_Ago1
PAZ
ArgoL1
ArgoL2
ArgoMid
Piwi_N
Motif
Other DBs
NCBI-GeneID:
136497024
NCBI-ProteinID:
XP_066348908
LinkDB
All DBs
Position
12:complement(65436518..65473304)
Genome browser
AA seq
1097 aa
AA seq
DB search
MCDLDMAMRVENSGRPRQVPIMVRKKRTGPGGSGETSGESSGGSGQGSQRPERTQQPGGG
RGWVPQQGGRGGGQHQGRGGHFQGHGGPGPHHPGGGPPEYHPREYQGRGGEYQGRGGDYQ
GRGGARSRGGMPQPYYGGHRGGNVGQNVPPGPSRTVPELHQAPYIQYQAPVVSPSPSGPG
SSSQPVAEVSSGQVQQQFQQLAIHGQTSTSQEIQVAPASSKSVRFPLRPGKGTYGDRCIV
KANHFFAELPDKDLHQYDVSITPEVTSRGVNRAVMGELVTLYRNSHLGGRLPAYDGRKSL
YTAGPLPFTSMTFEITLQDEEDRLGGGQGGQRRERVFRVVIKFAARADLHHLAMFLAGRQ
ADAPQEALQVLDIVLRELPTARYCPVGRSFYSPNLGRRQQLGEGLESWRGFYQSIRPTQM
GLSLNIDMSSTAFIEPLPVIDFVAQLLNRDISVRPLSDSDRVKIKKALRGVKVEVTHRGN
MRRKYRISGLTSQATRELSFPVDDRGTVKTVVQYFMETYGFSIQHTTLPCLQVGNQQRPN
YLPMEVCKIVEGQRYSKRLNEKQITALLKVTCQRPQDRELDILQTVHHNAYYADPYAQEF
GIRIDERLAAVEARVLPPPRLKYHDSGREKDVLPRVGQWNMMNKKMVNGGRVSNWACINF
SRNVQDSAARGFCHELAVMCQISGMDFALEPVLPPVTARPEHVERALKARYQDAMNILRP
QGRELDLLIVILPDNNGSLYGDLKRICETDLGLVSQCCLTKHVFKMSKQYLANVALKINV
KVGGRNTVLVDALTRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKY
AGLVSAQAHRQELIQDLFKVWQDPQRRTVTGGMIKELLISFKRATGQKPQRIIFYRDGVS
EGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRTVDRSGNI
LPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYTY
ARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSMASGARGPPPGGARSIRGAGSVAV
RPLPALKENVKRVMFYC
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgaccttgacatggcgatgcgggtggagaacagcgggcgcccccgtcaagtgccc
atcatggtgaggaagaagagaactggccctggcggctctggagaaacttctggagagtct
tcaggaggttctggacaaggttcacagcgacctgagcgaactcaacaacctgggggagga
cgtggctgggtgcctcaacagggtggccgtggtggtgggcaacaccagggtcgtggtgga
cattttcagggccatggaggaccagggccacatcaccctggtggtgggccacccgagtat
cacccgcgtgaataccagggacgtggtggtgaatatcagggacgaggtggtgactaccag
ggacgtggtggcgcccgctccagaggtggaatgccacagccatactatggtgggcatagg
ggaggtaatgttggacaaaatgttcctccaggtccatctagaacagttcccgagctgcac
caagccccctatatccagtatcaagccccggtggtttcaccatccccatcgggacctggc
tcatcctcacagcctgtggcagaggtgagctctggacaagtccagcaacagtttcagcaa
cttgccattcatggtcagacttccacgagccaagaaattcaagtggcaccagcatcaagc
aaatcggttcgattcccgttgcgccctggcaagggcacttatggggacaggtgcattgtg
aaggcaaatcatttttttgctgagcttcctgacaaagaccttcaccaatatgatgtatct
ataacacctgaggttacttcacgtggcgttaatcgtgctgtcatgggagagcttgtaaca
ctatatagaaactcccatttgggtgggcgtctacctgcgtacgatggaagaaagagcctt
tatactgctggaccattgccatttacttctatgacatttgaaattaccttgcaagatgag
gaagatagacttggcggtggccaaggtggacaaaggcgcgagagagtatttagggtggtg
atcaaatttgcggcccgtgctgatctccaccatctggctatgtttctagctggaaggcaa
gcagatgctcctcaagaagctcttcaagtgcttgacattgtactacgtgaattgcctact
gcgaggtattgtcctgttggtagatcattttattctcctaacttagggagacgccagcaa
cttggtgagggtttggaaagttggcgcggcttttaccaaagcataaggccgacacagatg
ggcctttcactgaatattgatatgtcctctactgcatttatcgagcctctccctgtgatc
gattttgttgctcagcttcttaacagagatatctcagttagaccattgtctgattcggat
cgtgtgaagatcaaaaaagccctaagaggtgtgaaggtcgaggtcactcacaggggaaac
atgcgcagaaaatatcgcatttctggcctcacctcacaagcaacaagagagctatcattc
cctgttgatgatcgtggtactgtgaagactgtggtccaatacttcatggagacttatggt
tttagtatccagcacaccactttaccgtgcttgcaagtgggcaatcaacaaagaccaaat
tatctgccaatggaggtttgcaagatagttgaaggacagcgttactcaaagcgactcaat
gagaagcaaatcactgctctacttaaagtgacctgccagcgtcctcaagatcgtgagctg
gacatcttacagactgtgcatcacaatgcatactatgcagacccatatgcacaggaattt
ggtataagaattgatgaacgtcttgcggcagttgaagctcgtgttctgccaccaccaagg
cttaaataccatgatagtggccgagagaaggatgttttacccagagttggccaatggaac
atgatgaataagaaaatggttaatggtggcagagtcagcaactgggcatgtattaacttc
tctcggaatgtgcaagatagtgccgctaggggtttctgtcatgagctggcagtcatgtgc
caaatatccggaatggattttgctcttgagcctgtgctgcctccagtgactgcaaggcct
gaacatgttgaaagagcgttaaaggcacgttatcaagatgcaatgaacatactgaggcca
cagggcagggaactcgatctgctgattgtaatactgccagacaataatggttctctttat
ggggatctcaaaaggatctgcgagactgatcttggattggtctcccagtgttgtctgact
aaacatgtttttaagatgagcaagcagtatcttgcaaatgttgcactcaaaataaatgtt
aaggttgggggaaggaatactgtacttgtagatgctttgacaaggagaatcccccttgtc
agtgacagaccgaccataatatttggtgctgatgttacccatccacatcctggagaagat
tccagtccttccattgcagctgttgttgcttcgcaagactggcctgaggtcaccaaatat
gctggactagtgagtgcccaagcccatcgccaggagctgatacaggatcttttcaaagta
tggcaagacccgcagagaaggacagtaactggtggcatgataaaggaacttctcatttct
ttcaagagggcaactggacagaagccccaaaggatcatattctacagggatggtgtcagt
gagggacagttctatcaagtattgttgtatgaacttgatgccatcagaaaggcctgtgca
tccctggagcccaattaccagcctccagttacttttgtcgtggtccagaagcgacatcac
actaggctgtttgctaataaccacaatgaccagcgtacagttgatagaagtggaaacata
ctgcctggcaccgtggttgattcaaagatttgccatcctactgaatttgatttctacctg
tgtagccatgctggcattcagggaacaagccgccctgctcattaccatgtcctgtgggat
gagaacaagtttacagctgatgagctgcagactctgacaaacaacctgtgctacacgtac
gctaggtgcacccgctctgtgtcaattgtgcccccggcatactatgctcatctggcagcc
ttccgagctcgcttctacatggagccagatacctctgacagtgggtcaatggcgagtggc
gctcgtggccccccaccaggtggtgcacgcagcatcagaggggcggggagtgttgcggtc
aggcccctacccgctctcaaggaaaacgtgaagcgtgtcatgttttactgctga
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