Miscanthus floridulus: 136497070
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Entry
136497070 CDS
T10264
Name
(RefSeq) nuclear pore complex protein NUP93A-like
KO
K14309
nuclear pore complex protein Nup93
Organism
mflo Miscanthus floridulus
Pathway
mflo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
136497070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136497070
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
136497070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
TPR_14
TPR_12
TPR_8
TPR_2
TPR_1
Motif
Other DBs
NCBI-GeneID:
136497070
NCBI-ProteinID:
XP_066348951
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All DBs
Position
1:complement(145872052..145880289)
Genome browser
AA seq
874 aa
AA seq
DB search
MAGVGGSGSGGGGGGDAEMGGWTGLLHSSTKLLEQAAPTPHFPPLQRNLDQLEALSTKLK
AKTIRAEAPSQSLSATRLLAREGINAEQLARDLKSFELKTTFEDVFPSEATTVEEYLQQL
HEMAIVSSIQEAQKDNLRSFNNYMMQVLEDDWQKEKRDFLQSLSRLSALPKRNTNLSTSG
LARPALMPPSTSNLHAPSGLPSAEVMPILNKTIIEKKSSVYAGVVRDLNDARGRSLPFNP
ATAFRAAYESLSVDAAGTKSVTMQKVWHLIQALVGEGSTHRIGSRKMSLVVGARRHLEWG
HEKYILETINSHPAHAALGGSVGNLQKIRAFLRVRLRDQGVLDFDATDLRRQPPVDTTWQ
QIYFCLRTGYYDEARQVAQSSRAAYNFAPLLADWISSNGAVSPETALAASEECDKMLRMG
DRPGRPGYDRKKLLLYAIICGCRRQIERLLKDLPTLFNTIEDFLWFKLSALREYTNASSS
NLMNEGLVPYTLDDLQSYLNKFEPSYYTKSGKDPLVYPYILFLSIQLLPAILYLSKEVGE
DGYHVDAVHISIALADHSVLPDGIGSGQKIGVMDACAEAASIIRQYGSIYLRNGNIDLAL
EYYAQAAAAMGGGEVSWMGEGQADKQRQRSLMLKQLLTEILLRDGGIQLLLGPNGMGEEG
ELKKYMMDWRSRQQFLLEAAHRCQEAGLYDKAVEIHKRVGAFAMALQTINKCLSDAVCAM
AWSMLDGESRAAALINSGNEILETARYSSEASIQEKDLISEQQTVLRQLEAILHIYRLAR
AGQTVDALRETIRLPFLHLDTQAPNVTVDIFRNLSPHVQACVPDLLKVALNCIDNVRDTD
GTLRAVKSKIANLVASNVSRNWPQDLYQKVAQWI
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgtcggtggcagcggcagcggcggtggaggtgggggcgacgcggagatgggc
ggttggacggggcttctccactcctccacgaagctcctcgagcaggcggcgcccaccccg
cacttccctccccttcagaggaacctggaccagctcgaggcgctctccaccaagctcaag
gccaagaccatccgcgctgaggctccgtcccagtcgctctccgccaccagattgctagca
cgcgaggggatcaatgccgagcagctcgccagggacctcaaatcattcgaactcaagaca
acctttgaggatgtttttccatctgaagcaactactgttgaggagtacttgcagcagctt
catgaaatggccatagtttcatccatccaagaagctcaaaaggacaacttaaggagtttt
aacaactatatgatgcaagttcttgaggatgactggcagaaagagaagagagacttcttg
cagagtctaagccggctttctgcattacccaagagaaacactaatctctcgaccagtggg
ctggctcgccctgctttaatgccaccatcaacttccaatcttcatgctccatcaggcctg
ccttctgcagaagtcatgcctatactgaacaagactattatcgaaaaaaaatcttcagtt
tatgctggggttgtgagggacctcaatgatgctagaggacgcagtctaccttttaatcct
gctacggcttttagggctgcttatgagtccttgtctgttgatgctgctggcacaaagtca
gtgactatgcagaaagtgtggcatctaattcaggcattagttggggaagggtcaactcat
cgaattggttcaagaaaaatgtcactagtggtaggtgcaaggcgccatcttgaatggggt
catgagaagtacatacttgagaccatcaatagccatccagctcatgctgctcttggtgga
tctgttggcaatcttcagaagatccgagcatttcttcgggtaaggctgcgggatcaaggt
gtgctagactttgacgcaaccgatctacgcagacagcctccagtggatacaacctggcag
cagatttatttctgcttgagaaccggatactatgatgaagcaagacaagttgcccaatca
tctcgtgctgcatataacttcgctcccctgcttgcagattggatttctagtaatggtgct
gtatcacccgagactgctctggcagcttctgaggaatgtgataaaatgctcagaatgggt
gatcggccagggcgtcctggttatgacaggaagaagttgctgctttatgccataatttgt
ggttgtcggcggcaaattgaaaggctgctaaaagacctgccaacactttttaacactata
gaggatttcttgtggtttaagttgtcagctctgcgggaatacaccaatgcatcttcttct
aatcttatgaatgaaggcttggtgccttatacgctggatgacttgcaaagttacttgaat
aaatttgagccatcatattatacaaagagtgggaaagatcccctagtctatccctacatt
ctgttcttaagcatccaattactcccagcaattctttatttgtctaaagaagttggagag
gatggataccatgttgacgctgtgcatatttcaatcgctttagctgaccatagtgttctc
cctgacggtattggatcaggccagaaaatcggcgtcatggatgcctgtgcagaggctgca
agcataatacggcagtatggctctatatacttgcgtaatggtaatattgatttagccttg
gaatattatgcacaagctgctgctgccatgggtggaggtgaggtatcgtggatgggtgaa
gggcaagctgataagcagcgacaacgaagtttgatgttgaagcaactactgacagagata
ttgctaagggatggtggtattcaacttttgcttggtccaaatggaatgggagaagaagga
gaactgaaaaagtatatgatggattggagaagtaggcagcaattcttacttgaagctgcc
catcggtgtcaagaggctgggctctatgacaaagctgtggaaattcacaaaagagtagga
gcctttgccatggctcttcagacaataaacaagtgcctgtctgatgcagtctgtgccatg
gcatggagtatgctagatggcgagagtcgtgctgctgccctaattaattctggcaatgaa
attttggagacagctagatattcttctgaagccagcattcaagagaaggatctcatttct
gaacaacaaactgtgctgagacagcttgaagctattctccatatttataggctagctcga
gctggacagactgtagatgctttgagggaaaccatcaggctacccttccttcatctggac
actcaggctccaaatgtgactgttgacattttcaggaacttgtcaccccatgttcaagct
tgcgtgccagatctcctgaaggttgctctaaattgcattgacaatgttagagatactgat
gggaccttgcgcgctgtcaaatcaaagattgcaaaccttgtagcaagcaacgtgagccgg
aattggccacaggatttgtatcagaaggtggcacagtggatatga
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