Miscanthus floridulus: 136497108
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Entry
136497108 CDS
T10264
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mflo04131
]
136497108
04121 Ubiquitin system [BR:
mflo04121
]
136497108
Enzymes [BR:
mflo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136497108
Membrane trafficking [BR:
mflo04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
136497108
Ubiquitin system [BR:
mflo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
136497108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_11
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
zf-RING_16
Zn_ribbon_6
DUF7129
zf-Nse
DUF7410
zf-C2HE
Zf_IFT144_1st
HypA
DUF8054_C
Motif
Other DBs
NCBI-GeneID:
136497108
NCBI-ProteinID:
XP_066348992
LinkDB
All DBs
Position
1:complement(146305105..146307785)
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AA seq
285 aa
AA seq
DB search
MSDGRQSYWCYQCRQRVRPRGREMVCPYCDSGFVAEMDDVDALMSHFVGMDPDFHRDPRF
GIMEAISAVMRHGMAGMDREVDVRGRPNIFSDLEMEFGSGPWLLFRGQLPGHLTEDNGFD
VFINGRRGVGMRRANIADYFVGPGLDDLIEQLTQNDRRGPPPAAQSSIDAMPTVKITQRH
LSGDSHCPVCKEKFELGSEAREMPCKHLYHSDCIVPWLEQHNSCPVCRYELPTQGSTTGP
SCSRTRSTNQSQSSSSSSNSGRTNGRQRRRNPFSFLWPFRSSSSR
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatggcaggcaatcatactggtgttaccaatgccgacagagggtgaggcctcgt
ggccgggagatggtgtgtccctactgtgattctgggtttgtggctgaaatggatgatgta
gatgctctcatgagccacttcgttgggatggatcctgatttccatcgtgacccaaggttc
gggatcatggaagcgatctccgccgtgatgcggcatggtatggcagggatggacagggag
gttgatgtcagaggaaggccaaacatcttttcagacctggagatggagtttggttcaggg
ccatggctgctcttccgtggtcagctccctggtcatctcacggaggacaatggattcgat
gttttcatcaatggacgacgcggtgttggcatgaggagggccaacattgcagactacttt
gttggacctggattagatgatcttatcgagcaattgactcagaacgatcgtcgaggacca
ccacctgctgcgcagtcctcgatcgatgctatgcccacagttaagatcactcagaggcat
ctcagtggggactcacactgccctgtctgcaaggagaagttcgagttgggatcggaagca
agagagatgccatgcaagcatttataccactccgattgcatagttccttggttagagcag
cataattcctgccctgtttgccgttatgagctcccaacacagggttctactacgggacca
agctgctcacgcacaagatcaaccaaccaaagccagagctcaagtagttcaagcaacagt
gggaggaccaatggccgtcaaaggagaaggaacccgttctcgttcctgtggcctttccgc
tcatcaagttctcgctag
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integrated database retrieval system
