Miscanthus floridulus: 136497516
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Entry
136497516 CDS
T10264
Name
(RefSeq) LOW QUALITY PROTEIN: ABC transporter B family member 19-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
mflo Miscanthus floridulus
Pathway
mflo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
136497516
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mflo02000
]
136497516
04147 Exosome [BR:
mflo04147
]
136497516
04090 CD molecules [BR:
mflo04090
]
136497516
Enzymes [BR:
mflo01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
136497516
Transporters [BR:
mflo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
136497516
Exosome [BR:
mflo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
136497516
CD molecules [BR:
mflo04090
]
Proteins
136497516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
ABC_ATPase
AAA_22
AAA_16
Zeta_toxin
AAA_30
AAA_21
DUF87
AAA_15
Glyco_transf_22
Motif
Other DBs
NCBI-GeneID:
136497516
NCBI-ProteinID:
XP_066349448
LinkDB
All DBs
Position
12:complement(50476588..50483259)
Genome browser
AA seq
1260 aa
AA seq
DB search
MAEGDAGKAEAGSCSGAGGGGDAVKKRPEQSVAFHELFGFADPLDWLLMAAGSAGAVVHG
AAMPVFFLLFGELVNGFGKNQHNLRRMTDEVSKYSLYFVYLGLVVCASSYLEIACWMYTG
ERQVGALRKRYLEAVLRQDVGFFDTDARTGDVVFSVSTDTLLVQDAIGEKVGNFIHYLAT
FLAGLVVGFVSAWRLALLSIAVIPGIAFAGGLYAYTLTGLTSKSRDSYANAGIIAEQAIA
QVRTVYSYVGETKALNSYSEAIQNTLKLGYKAGMAKGLGIGCTYGIACMSWALVFWYAGV
FIRNGQTDGGKAFTAIFSAIVGGLSLGQSFSNLGAFSKGKIAGYKLLEVIRQRPTIVQDT
ADGRCLDEVHGNIEFKEVAFSYPSRPDVMIFRDFSLFFPAGKTAAVVGGSGSGKSTVVAL
IERFYDPNQGQVLLDNVDIKTLQLKWLRDQIGLVNQEPALFATTILENILYGKPDATMAE
VEAAATSANAHSFIALLPNGYNTHVGERGLQLSGGQKQRIAIARAMLKNPKLLLLDEATS
ALDAGSESIVQEALDRLMVGRTTVVIAHRLSTIRCVDMIAVIQQGQVVETGTHDELLAKG
SSGAYAALIRFQETARNRACPSTRKSRSSRLSNSLSTRSLSLRSGSLRNLSYSYSTGADG
RIEMVSNADNDRKYPAPRGYFFKLLKLNAPEWPYTILGAIGSILSGFIGPTFAIVMSNMI
EVFYYRNPNKMESKTREYVFIYIGTGLYAVVAYLVQHYFFSIMGENLTTRVRRMMLAVIL
RNDVGWFDQEENNSNLVAARMSTDAADVKSAIAERISVILQNTTSLLVSFVVGFIIEWRV
ALLILITFPLLVLANFAQQLSMKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQDKIL
SLFCSELRVPQMHSLRRSQISGALFGLSQLSLYASEALILWFGAHLVRTHVSTFSKVIKV
FVVLVITANSVAETVSLAPEIVRGGESIRSVFAILNSRTRIDPDDPDAEQVESVRGEIDF
RHVDFAYPTRPDVMVFKDFSLRIRAGQSQALVGASGSGKSTVIALIERFYDPLAGKVMVD
GKDIRRLNLKSLRLRIGLVQQEPVLFATSILENIAYGRDGATEEEVVEAAKVANVHGFVS
ALPDGYRTPVGERGVQLSGGQKQRIAIARAVLKDPAVLLLDEATSALDAESECVLQEALE
RIMKGRTAVLVAHRLSTIRGVDSIAVVQDGRVVEQGSHGDLVSRPDGAYSRLLQLQLHHG
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atggcagagggcgatgcggggaaggcggaggcggggagctgcagcggcgccggcggcggg
ggcgacgcggtcaagaagcggccggagcagagcgtggcgttccacgagctgttcggcttc
gcagacccgctggactggctgctcatggcggcgggcagcgcgggcgccgtcgtgcacggc
gccgccatgccggtcttcttcctcctcttcggcgagctcgtcaacggcttcggcaagaac
cagcacaacctccgccgcatgacggacgaggtgtccaagtattcgctctacttcgtctac
ctcggcctcgtcgtctgcgcctcgtcgtacctagagatcgcgtgctggatgtacacgggc
gagcgccaggtgggcgctctccggaaacggtacctcgaggccgtgctgcggcaggacgtg
ggcttcttcgacaccgatgcgcgtaccggcgacgtcgtcttcagcgtctctaccgacacg
ctcctcgtgcaggacgccattggcgagaaggtcggcaacttcatccactacctcgcgacg
ttcctggccgggctggtcgtcggattcgtctcggcgtggcggctcgcgttgctcagcatc
gccgtcatccccggcatcgccttcgccggcgggctgtacgcgtacacgctcactggcctg
acctccaagagccgggactcgtacgccaacgccggaatcatagccgagcaggccattgcc
caggtgaggactgtctactcctatgtgggggagaccaaggccctgaattcctactcggag
gcgattcagaacaccctgaagctgggttacaaggccgggatggccaaggggcttggcatt
ggctgcacctatggaattgcttgtatgtcatgggcactggtgttctggtacgccggcgtg
ttcatccggaatggccagacagatggtgggaaggccttcactgcaattttctcagcaatc
gtcggtggcctgagcttggggcagtcattttcaaaccttggagcattcagcaaagggaag
attgctggctacaagttgctggaagtgataaggcagaggccaacgatagttcaggacacg
gcagacgggaggtgccttgatgaagtacatggcaacatagagttcaaggaagtggccttc
agctatccttcccgcccggatgtcatgattttccgtgatttttctctcttcttccccgcg
gggaagaccgcagcggttgttggaggcagtgggtctggaaagagcacggttgttgctctc
attgagcggttttacgatcctaatcaggggcaagttttgctggataatgtggacatcaag
acgctgcaattgaagtggcttagggatcagattggtttggtgaatcaggaacctgcactt
tttgcaactacaattcttgagaacattctttatggcaagcctgatgccacaatggcggag
gttgaggctgcagctacttcagccaatgcccatagcttcattgctcttcttcctaatggc
tacaacactcatgtgggagagaggggacttcagctctctggtggtcagaagcaacgtatt
gccattgcccgtgcgatgctgaagaatccaaaactcctgctgctagatgaggccactagt
gcactcgatgctggttcagagagtatcgttcaagaggcccttgatcggttgatggtcggg
aggacgactgttgtgattgcccacaggttatcaacaataaggtgtgttgacatgattgcc
gtgattcagcaaggccaggttgttgagactggtactcacgatgaactcctcgccaaagga
agctctggagcgtatgctgcactcatcagattccaagagacagccagaaaccgtgcatgc
ccatcaacccgcaagtccaggtcatcccgcttgagcaattccctctccactcggtcactg
agcctcaggtcaggaagcttgaggaacctgagctactcatacagcactggtgctgatggc
cgcatcgagatggtttccaatgccgacaatgaccggaagtacccagcaccaaggggttac
ttcttcaagctcctaaaactgaacgcaccggagtggccttacaccatactgggggctatt
gggtccatcctatctggatttatcggcccgacatttgccattgtgatgagcaacatgatc
gaagtgttctattaccggaaccccaacaaaatggagagcaagaccagggagtacgtgttc
atctacatcggcactgggctgtatgcggttgttgcatacctcgtccagcattatttcttc
agcatcatgggcgaaaacctgaccaccagggtgcggaggatgatgcttgccgtgatttta
cggaacgatgtcggatggttcgatcaggaggagaacaattcaaaccttgttgctgctcgc
atgtccacggacgctgctgatgtgaagtcggccattgccgaacggatatcagttatcctg
cagaacacgacgtccctccttgtatccttcgtagtcggcttcatcattgaatggcgggtt
gccctcctcatcctcatcaccttccctctcctcgtcctcgccaactttgcccagcaactg
tcgatgaagggcttcgcgggcgacacggccaaggcccacgccaagacgagcatgatcgcc
ggggagggcgtgagcaacatccgcacggtggcggcgttcaacgcgcaggacaagatcctg
tcgctcttctgcagcgagctgcgcgtcccgcagatgcacagcctgcggcgcagccagatc
tcgggcgcgctcttcggcctctcccagctctccctgtacgcctccgaggcgctcatcctc
tggttcggcgcccacctcgtccgcacccacgtgtccaccttctccaaggtcatcaaggtg
ttcgtggtcctggtgatcaccgccaactccgtcgccgagaccgtcagcctggcgccggag
atcgtccgcggcggcgagtccatccgctccgtgttcgccatcctcaacagccggacccgc
atcgaccccgacgacccggacgcggagcaggtggagtcggtgcgcggcgagatcgacttc
cgccacgtcgacttcgcgtacccgacgcgccccgacgtgatggtgttcaaggacttcagc
ctgcggatccgggccgggcagagccaggcgctggtcggcgcgagcgggtccgggaagagc
accgtcatcgcgctcatcgagcggttctacgacccgctcgccgggaaggtgatggtcgac
ggcaaggacatccggcggctgaacctcaagtccctgcgcctcaggatcgggctggtgcag
caggagcccgtgctattcgccaccagcatcctggagaacatcgcgtacggcagggacggc
gcgacggaggaggaggtcgtggaggcggccaaggtggccaacgtgcacggcttcgtgagc
gcgctccccgacgggtaccggacccccgtgggcgagcgcggggtgcagctgtccggcggg
cagaagcagcgcatcgcgatcgcgcgcgcggtgctcaaggaccccgccgtgctgctgctg
gacgaggcgaccagcgcgctggacgccgagtccgagtgcgtgctgcaggaggcgctggag
cgcatcatgaagggccgcaccgccgtgctggtggcgcaccggctgtccaccatccgcggc
gtggactccatcgcggtggtgcaggacggccgcgtggtggaacagggcagccacggggac
ctcgtgtcccggcccgacggcgcctactcgcggctgctgcagctgcagctacaccacggc
tga
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