Miscanthus floridulus: 136497853
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Entry
136497853 CDS
T10264
Name
(RefSeq) replication factor C subunit 4-like
KO
K10755
replication factor C subunit 2/4
Organism
mflo Miscanthus floridulus
Pathway
mflo03030
DNA replication
mflo03410
Base excision repair
mflo03420
Nucleotide excision repair
mflo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
136497853
03410 Base excision repair
136497853
03420 Nucleotide excision repair
136497853
03430 Mismatch repair
136497853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mflo03032
]
136497853
03036 Chromosome and associated proteins [BR:
mflo03036
]
136497853
03400 DNA repair and recombination proteins [BR:
mflo03400
]
136497853
DNA replication proteins [BR:
mflo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
136497853
DNA Replication Termination Factors
ELG1-RFC complex
136497853
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
136497853
DNA repair and recombination proteins [BR:
mflo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
136497853
Check point factors
HRAD17(Rad24)-RFC complex
136497853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
AAA_22
Mg_chelatase
Rad17
AAA_16
Viral_helicase1
RCF1-5-like_lid
AAA_5
nSTAND3
RuvB_N
AAA_11
AAA_28
AAA_19
AAA_assoc_2
AAA_25
AAA_24
MeaB
AAA_30
DNAX_ATPase_lid
RNA_helicase
AAA_3
ABC_tran
IstB_IS21
NTPase_1
NPHP3_N
AAA_18
bpMoxR
SLFN-g3_helicase
KTI12
DUF6120
DNA_pol3_gamma3
DO-GTPase1
Motif
Other DBs
NCBI-GeneID:
136497853
NCBI-ProteinID:
XP_066349822
LinkDB
All DBs
Position
12:66213413..66219192
Genome browser
AA seq
334 aa
AA seq
DB search
MASSAADPAPADTYDIPWVEKYRPTRVADVVGNSDAVTRLEVIARDGNMPNLILSGPPGT
GKTTSILALAHELLGPSYREAVLELNASDDRGLDVVRNKIKMFAQKKVTLQPGRHKIVIL
DEADSMTSGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILG
RLMIVVEAEKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQENVFKVCDQPHP
LHVKNMMKNLLDGKFDEACSALKQLYDLGYSPTDIITTLFRVVKNYDMAEYLKLEMLKET
GFAHMRICDGVGSFLQLSGLLAKFALVRETAKAP
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctccgccgccgacccagcccccgccgacacctacgacatcccgtgggtggag
aagtaccgccccacccgcgtcgctgacgttgtcggcaactctgatgccgtcacccgcctg
gaggtcattgctcgcgacggcaacatgcccaacctcatcctctccgggcctcctgggacc
gggaagacgacgagcatcctggcgctggcgcacgagcttctggggcccagctaccgcgag
gccgtgctggagctcaatgcctcagatgacaggggtttggatgtggtgcggaacaagatc
aagatgtttgcccagaagaaggtcaccctgcagccagggcggcacaaaatcgtgatcttg
gatgaggctgacagcatgacatcaggagcacagcaagctctgcgaagaacaatggagatc
tattcaaacaccactcgatttgcactagcatgcaacacctcatcaaagataattgaaccc
attcaaagccgatgtgctattgtcaggttctcaaggctctctgaccaggagatccttggc
cgcctcatgattgttgtggaagctgagaaggttccttatgtgccagaagggctggaagct
atcatatttactgctgatggtgacatgagacaagctttgaacaacctgcaagcaacattt
agtgggttccgctttgttaatcaagaaaatgtgttcaaggtgtgcgatcaaccacatccc
ttacatgtcaagaacatgatgaaaaacctgcttgatggaaagtttgatgaggcctgctct
gcactgaagcaactttatgatttgggatactctcctactgacattatcactactctcttc
cgtgttgtgaagaattatgacatggctgaatatctgaagctggaaatgctgaaggaaacc
ggatttgcacacatgagaatctgtgatggtgttggatcatttcttcagctttctggtcta
cttgcgaagtttgcgctcgtgagggaaactgcaaaagcaccatga
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integrated database retrieval system
