Miscanthus floridulus: 136497962
Help
Entry
136497962 CDS
T10264
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X1
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
mflo Miscanthus floridulus
Pathway
mflo04148
Efferocytosis
Brite
Membrane trafficking [BR:
mflo04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
136497962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136497962
NCBI-ProteinID:
XP_066349966
LinkDB
All DBs
Position
12:complement(81125913..81133048)
Genome browser
AA seq
978 aa
AA seq
DB search
MSTAPARRAHPPLQNGAGGDDGDDEREEEEEEVGDDEAEEEDEEEPRLKYQRLGGSVPAI
LSTDAAAAIAVADRMVALGTHNGTLHILDFQGNQVKEIAAHTATINDISFDGDGEYIGSC
SDDGTVAINSLFTDEKLKFEYHRPMKAIALDPNYARNYRRFATGGLAGQVLVLTKKSWGG
YHKKVLRDGEGPIHSMKWRADLLAWANDAGVKVHDMRTDKGIAFIERPKGIPRPEFLLPD
LVWQDDTVLVIGWGTSVKIAAIRTDLSQGLNGLQRTITTASSEKYVDIVGSFQTGYHISG
IAPFGDLLVVLAYIPDEDEKEKTFSTSVTSRQGAAQRPEIHLVSWKNDELTTDALPIHGY
EHYKAKDYALAHAPFSGSSNAGGQWAAGDEPLYYIVSPKDIVVAKPRDAEDHIAWLLQHG
FHEKALAAVEAGQGRTELLDEVGSRYLDHLIIERKYAEAAQRCPKLLRGSPSAWERWVFH
FAHLRQLPVLVPYVPTENPQLSDTAYEVALVALTTNPSFHELLLTTIKNWPPTLYSASPV
ISAIEPQLNSSSMTDSLKEALAELYVINGQYEKALSLYAELLKPEVFEFIEKYNLHDAIC
DKVANLMIVDNKRTVHLLIQHRDLIPPCEVVEQLLHTSKNCDKRYLLHLYLHALFEIDIH
AGKDFHDMQVELYAEYEPRMLLPFLRTSQHYRLDKAYEIFAQKELVREQVFVLGRMGNAK
EALSTIINKLEDMQEAVEFVTEQHDDELWEELIRQCLQKPEMVGNLLEHTVGNLDPLYIV
SLVPDGLEIPRLRDRLVKIVTDYRTETSLRNGCNDILKVNFLSYTVLLRISIVSNSEYFP
SETCLVQADCVNLLVKYYHEARRGVYMASMDEEVHGNRTDDGSSRGHERSSSVRALDIKS
RTRCGARCCLCFDPLPIQDISVIVFYCCHAYHLSCLEGGLDSMRSNSNQDSDSGTDDEDG
SQLGQSRMRCVLCTTAAA
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgcgcccgcgcggcgcgcccacccgccgctgcagaacggcgcggggggcgac
gacggggacgacgagcgcgaggaggaggaggaggaagtgggcgatgacgaggcggaggag
gaggacgaggaggagccgcggctcaagtaccagcggctgggcgggagcgtgccggcgatc
ctctccaccgacgccgcggccgccatcgccgtcgccgaccgcatggttgcgctcggcacc
cacaacggcaccctccacatcctcgacttccagggcaaccaggtgaaagaaattgctgca
cacacagcaactatcaacgacataagttttgatggggacggtgaatatataggaagctgc
tcagatgatggcacagtggcaataaacagcctcttcactgatgaaaaactaaagtttgag
taccatcgccccatgaaggcaattgctctagaccctaattatgcccggaactatagaaga
tttgctactggtggtttggcaggccaagtacttgtgttgacaaagaagtcttggggaggt
tatcataagaaggttttgcgtgatggtgaagggccaatccattcgatgaagtggagggcg
gaccttcttgcttgggctaacgatgcaggggtgaaagtgcatgatatgaggacagacaaa
ggaattgcattcatagagagaccaaaaggcattcctcgaccagagttcttgcttcccgac
ctagtctggcaggatgatacagtcttagttattggatggggaacaagtgtcaagattgca
gcgattcgaacagatttatctcagggactcaatggcctacaaaggactatcaccacagct
agttctgagaagtatgtggacattgtaggctcattccaaacaggttaccacatatctggg
attgctccatttggtgaccttttagttgtacttgcctatattcctgacgaggatgaaaaa
gagaaaacatttagtacttctgttacttcacgacagggagctgcacagcgtccagaaata
catcttgtatcatggaaaaatgatgaacttactacagatgctctgcctattcatggttat
gagcattacaaggcaaaggactatgctcttgcgcatgcacctttctcaggaagtagcaat
gcaggtggacagtgggctgctggcgatgaacctttgtattacattgtgtctcctaaggac
atagtggttgcaaagccaagagacgctgaagatcatattgcttggcttcttcaacatggt
ttccatgaaaaagcattggctgcagttgaggcagggcaaggacgcactgagcttcttgat
gaggtgggttcaagataccttgatcacttgataattgaaagaaaatatgctgaagctgct
cagcgctgcccaaagttgctgcgaggatctccttcagcatgggagagatgggtcttccac
tttgctcatcttcgccaacttcctgttttggtcccttatgtacctacagaaaatcctcag
ctgagtgatactgcgtatgaggttgcccttgttgctctaactaccaatccttctttccat
gaacttctcttgactactatcaaaaattggccaccaacattatactcagcttcaccggtc
atatctgccattgagccacagctaaactcctcatcgatgactgattcattgaaagaggca
ttagcagaattgtatgtgatcaatggtcagtatgaaaaggcactttctctttatgctgaa
ctcctgaagccagaagtattcgagtttattgagaaatacaacttgcatgatgccatttgt
gataaggttgccaatcttatgatagtggataataaaagaacagttcacctactgatccaa
caccgtgatctcattcccccatgtgaagttgtggagcagttgttgcataccagtaaaaac
tgtgacaagagatatttgttacacctatatttgcatgctttatttgagatagatatacat
gctggaaaggattttcatgatatgcaggtggagctttatgcagaatacgagccaaggatg
ctactacccttcctccgaaccagtcagcattacaggcttgacaaggcatatgaaatcttt
gcacaaaaggaacttgtaagggagcaggtttttgtccttggtcgaatgggcaatgctaag
gaagctctttcgacaattataaacaaactggaagacatgcaggaggctgttgaatttgtt
acagagcaacatgatgatgaactgtgggaggaactgattagacaatgcctccagaagcct
gaaatggtagggaatctattggaacataccgttggcaatctggatcctctgtacattgtc
agtttggttcctgatggcttagaaatacctcggttgcgggatcgtcttgtgaaaattgtg
acggattaccgaacagaaacttcattgcgaaatggatgcaatgatatacttaaggttaac
tttctttcctatactgtgctgctccgtatttcaatcgtctcgaattctgagtattttcca
tccgaaacttgccttgttcaggctgactgtgttaaccttttggttaaatactaccatgag
gctcggcgtggtgtctacatggcaagcatggacgaggaggtacatggaaacagaactgat
gatggatcctctcgggggcatgagagatcatctagcgtccgggctctagatatcaagtcc
agaacgagatgtggtgcccggtgttgcttgtgcttcgatcctttgcctatccaggacatc
tctgtcatcgtgttctactgctgccatgcatatcatctgtcttgccttgaaggtggttta
gactcgatgagatcaaacagtaaccaggatagtgacagtggcacggacgatgaggatggt
tcccaattaggccagtctcgtatgcgctgtgtattgtgcactactgctgctgcataa
DBGET
integrated database retrieval system
