Miscanthus floridulus: 136498122
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Entry
136498122 CDS
T10264
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 1-like isoform X1
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mflo04121
]
136498122
Enzymes [BR:
mflo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136498122
Ubiquitin system [BR:
mflo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
136498122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf_RING_Vps8_fungal
AF_0924
Prok-RING_4
zf-RING_Vps41
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
136498122
NCBI-ProteinID:
XP_066350159
LinkDB
All DBs
Position
12:84547603..84552207
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AA seq
502 aa
AA seq
DB search
MKSRFLILCLMVCLMARMGAANVVLMGNNLTVSFDDIEASFSPGVKGSGVSGVVYASEPL
NACSPLTIKAVNGPPSPFALIIRGGCAFDEKVKNAQDAGFKAAIVYDNENSGVLVSMAGS
SSGIHIYAVFVSKASGEVLKKFSGHADVEVWILPTFENSAWSIMAISLISLIAMSAVLAT
CFFVRRHRIRRDHPRIPEDREFHGMSSHLVKAIPSLVFTKVQEDNCTSSMCAICLEDYNV
GEKLRVLPCRHKFHASCVDMWLTSWRTFCPICKRDARSGASELPATEATPLLSSAARLPS
RPSSFRSSVAASPPRPISRHPSSHSVSRAYSVSSTPNSPNPFRSHISSPGIRASRSIADL
PNMSSPHPRISHLSLSTHSLVGSHLSPPISIRYPLPHVAHSGYGSPSPHVSSSYISNPGY
GSSSYCYLGGSSQHGTYLRRSGESGPSLCTMVPRSPQQSQWEANVVAGASSAKSLRQSYL
RHCDDSDASLSDMTSAQSLPGC
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtagatttctgattctttgtctgatggtctgtcttatggctcggatgggagct
gccaatgtcgtgctaatggggaataatctgaccgtgtccttcgatgacattgaggcgagc
ttttctccaggagtgaaagggtctggagtcagtggagtagtttatgcttctgaacctttg
aatgcctgcagcccattaacaatcaaagcagtcaatggccctccgtctccctttgcgtta
attataagaggcgggtgcgcatttgatgagaaagtaaaaaatgcacaggatgctggattt
aaagctgcaatcgtctatgacaatgaaaatagtggggtcctggtttcaatggctggaagc
tcaagtggcattcatatatatgctgtgttcgtttcaaaggcctcgggagaggtgttgaag
aaattttcaggccatgcggatgtagaggtgtggatactacctacattcgaaaactcggcg
tggtcgatcatggcaatctcactcatatcgctaattgccatgtctgctgtactagctacg
tgtttctttgtgagaaggcatcgaataaggagggaccaccctagaatcccagaagatcga
gaattccatggaatgagcagtcatttagttaaggctattccaagtcttgtttttacaaaa
gtgcaagaagataactgcacatcatcaatgtgtgctatttgcttggaagactacaatgtc
ggagaaaagctaagagtactaccttgccgtcataagttccatgcatcttgtgtggacatg
tggctgacttcttggagaacattctgtcctatatgcaagagagatgcaaggagtggagca
tcagaacttcctgccacagaggctacccctttactttcttctgctgctcggttaccttct
cggccatcttcattccggtcgagtgtggcagcatcccctccaaggccaataagccggcat
ccttcatcgcactcggtttctcgtgcttactctgtttctagtacccccaattctcccaac
ccctttagatctcacataagctcacctggcatccgtgcaagcagaagcatcgcagacctt
ccaaatatgtcatctccccatcctcgcatctcacatttgtcgttgtcgacgcactccctg
gttggcagccacttgtctccaccaatcagtataaggtatccgttgccccatgtggcccat
tcagggtatggatcacccagtccacatgtgagttcatcctacatctccaatcctgggtat
ggttcttcaagctactgctatctgggaggctccagccagcatgggacgtacctaaggcga
agcggagaatcggggccaagcctgtgtaccatggtccctcgatcgccgcagcagtcgcag
tgggaggcgaatgtagtggcaggtgcatcatcagcaaagtccctgcggcagtcctacctg
agacactgtgacgattcagatgccagtttgtctgacatgacgtcagcccagtcgttgccg
gggtgctga
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