Miscanthus floridulus: 136499154
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Entry
136499154 CDS
T10264
Name
(RefSeq) TBC domain-containing protein C1952.17c-like isoform X1
KO
K18469
TBC1 domain family member 5
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mflo04131
]
136499154
Membrane trafficking [BR:
mflo04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
136499154
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF6277
Motif
Other DBs
NCBI-GeneID:
136499154
NCBI-ProteinID:
XP_066350945
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Position
13:83682606..83687616
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AA seq
829 aa
AA seq
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MAEEERRRRRRFANLRSVRWRVDLGILPASPGASVDEFRRAAADSRRRYVSLRRRLMVDP
HLPKEDRSSNLVVDNPLSQNPDSSWGRFFRGAELEKTVDQDLSRLYPEDGSYFQTPNCQA
MLRRILLMWCLQHPECGYRQGMHELLAPLVYVLQVDIDKLSQVRKLHEDCFNDDFDGVPF
PDTDMVFSYKPRKDPKWHSGADNGDDSESASRVNTLDELDLDTKEIISLSDAYGAEGELG
IVLSERFMEHDAYSMFDGLMDGGSGVVRMAEFFSTSKVGSSSSLAPVIEASSSLFHLLSI
IEPSLHSHFIELDVEPQYFALRWLRVLFGREFCLNNLLVVWDEVFACSNDMLLGENEEYS
FKILCSSRGAFIAAMAVSMILHLRSSLLATEINTSCLQRLLNFPNNVDVHKLIEKAKSLQ
SIAVDANVSSTPLLSKKDSCDYDRVYSNLATSTPPRTPLHPLPESYWEKQWRNLYNDGTA
PKESDKGLSYKRSLKQSLSKRLGLSRTESDPSPVKVVSVKSDTKNSVRRCLLNSYSDKVV
QSSEVAGKFQQDEFPIVSIYKEPLMNSERSSQLKLKAASENLTVSPPSVTKFNPLIDSPV
KPAEESSTKRTEACSSGENSPVFYAACAGNEHENCHDNDSERSSITSNSCAGDDDRDEVL
ADESSSCNCEDKNVSEATESATNVDPVGPSERTTVSNERKPFINKLQLFLRFGRSSAEGN
VEKGSAEASNDKHDAVLPCSSAADVSSDNSRSGINLASGDNKKVMGTLKNIGQNMLENIQ
VIESAFQQDHAQPSAMENFSNNILGGKGQVTAMAALTELRKISNLLREM
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagaggagaggcggcggcggcggcggttcgcgaatctgcgcagcgtccggtgg
cgggtcgatctcggcatcctgccggcgtcgcccggggcctccgttgacgagttccgccgc
gccgccgcggattcgcggaggagatatgttagtttgaggcgccgccttatggtagaccca
catcttccaaaggaggacagatcatccaaccttgttgttgacaacccgctctctcagaac
ccagatagcagctggggccgtttcttcagaggggctgagttggagaagacagttgaccaa
gacttgtctcgattatacccagaagatggtagttactttcaaacacctaattgccaggcc
atgctgaggagaatactgttgatgtggtgccttcagcacccggagtgtggatatcgccaa
ggaatgcacgaactactagctcctctagtgtatgttcttcaagttgacattgataaactg
tctcaagtgaggaagctccatgaggattgcttcaatgatgattttgatggagtgcccttc
cctgatacagatatggtttttagttataaacctagaaaggacccaaaatggcattctgga
gctgacaatggcgatgattctgaaagcgcttccagagttaacacacttgatgagcttgac
ctggatacgaaagaaataatttcacttagtgatgcatatggagctgagggtgaactaggc
attgtattgtctgaaaggttcatggaacatgatgcctattcaatgtttgatggtttgatg
gatggaggtagtggagtggtccgcatggcagagtttttctctacatccaaggttggatct
agctcaagtctagcgcctgtcattgaagcctcatcatctttatttcatttgctatccatt
attgagccatctcttcatagccatttcattgagctggatgtagaaccacagtatttcgct
cttcgttggctgcgggtcttgtttggacgggagttctgcctcaacaatcttttagtcgta
tgggatgaagtttttgcttgctccaatgacatgctacttggagaaaatgaagaatacagc
tttaagatattgtgctcgtctagaggggcattcatcgcagccatggcagtctctatgatt
cttcaccttagatcatctctgctggccactgaaatcaatacgtcgtgtcttcagagatta
ttgaactttccaaacaatgttgatgtgcataaattaattgagaaagctaaatctctgcag
tctattgctgttgatgcgaacgtatcatccacacctctcttatcaaagaaggatagttgt
gattatgatagggtttacagtaatcttgctacttcaactcctccaaggactccgttgcat
ccattacctgagagctactgggaaaagcagtggagaaatctgtacaatgacggaactgct
cccaaagagagtgataagggtctttcttataagagatcactaaagcaatctttaagcaag
aggcttggtttatctaggacagagtcagatccttctccagttaaggtagtcagtgtgaag
agtgacaccaagaattcagtgagacggtgtcttttgaactcttattcagataaagtagta
cagtccagtgaagttgctggaaagtttcagcaagatgaattccctatcgtatcgatttac
aaggagcctcttatgaattctgaaaggtcctcacaactaaagttaaaggcagctagtgag
aatttaacagtaagcccaccaagtgtgacaaagttcaatccacttatagattcaccggtg
aagcctgctgaagagagttcaacgaaaaggacagaagcttgttctagtggtgagaattct
ccggtgttttatgccgcttgtgctggcaatgaacatgagaattgtcacgataatgattct
gagagaagtagcatcacatcaaattcatgtgccggcgatgatgatagggatgaagttcta
gcagacgagtcgtccagctgtaattgtgaggataaaaatgtctcagaagcaacagagtct
gcaacaaatgtagatccagttggaccctctgagagaactacggtatctaatgaaagaaag
ccatttattaacaagctacagttgttcttaaggtttggcagatcttcagccgaaggcaat
gtggagaagggcagtgccgaggcatcaaatgataaacatgatgcagttcttccctgctct
tcagctgctgatgtgagttcagataactcccgcagcggcataaatttggcttctggtgat
aataagaaggtgatgggcacactgaagaatattggacagaacatgcttgaaaatatccag
gtgatcgaatcagcgttccagcaagaccacgcgcagccaagcgccatggagaacttctca
aacaacatcctgggaggcaaagggcaggtcactgcgatggctgccctgacagagcttcgc
aagatcagcaacctgctccgcgagatgtaa
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