Miscanthus floridulus: 136499224
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Entry
136499224 CDS
T10264
Name
(RefSeq) pre-mRNA-processing factor 39-2-like
KO
K13217
pre-mRNA-processing factor 39
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mflo03041
]
136499224
Spliceosome [BR:
mflo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
136499224
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
Motif
Other DBs
NCBI-GeneID:
136499224
NCBI-ProteinID:
XP_066351031
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All DBs
Position
13:complement(51373240..51388269)
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AA seq
1169 aa
AA seq
DB search
MEPEADAMALASDAAAPELPSSQLDFFKTRVRLLCDSNTGDFDAWVSLINAAEGASADDI
EVISLVYHSFLLEFPLCYGYWIKYAAHKARLCTTRYVVDVYEQAVHAVPHSVDIWVSYCG
FGICAFEEPAHIRSLFERALSLVGKDYLCYHLWDMYIEFETSQKQLVQLATIFINTLKFP
TKKLHMYYESFRKFLTLLEQEATSCVAEILSEEMHASEMIGAEDSELDISTIISDLFDQK
GGHLSPEALKHYLSAGERLYKTSSKIYKEICYFEASIKRPFFHVNPLDDDQLENWHQYLD
FVEKNGDFDWAVKLYERCLIPCANYSEFWIRYSEYVDAKGGREIANHALGRASSCFVKEV
PTFCMYYALFKEQIGDAPAARSLFTKARSYFTSGFYANINRLANMEKRMGNTKAASEIYE
IAIEDAVQKKNIELLPDLYSNFAQFIYAASHSIIEAKQVFVKGINRAPCKPLIKGFIQFM
STHGGPKDIPLLDSVISNAVTPGSDVSTALSTEDREDISLLFLEFVDLYGGIKELRKAWA
RHSKLFPHSTGNISRHYSTMGNSLQDTNKRRKTEPLMVARDQSLEDTIELKQPPKTDDFS
LIVDKESEPQVDKDIVDSGKGHRDAGEQKALEIVNSHKETIRTAQECTDMVHSEHILDKN
GMQKQMNSHAKEESNQDLMLHEQNDEKTNSRAAEAPVAESGDCDSPSKAIASSENINSEG
KVIEVSASSHLETVCSKYDLPSGSNMHNEGNSSGPARISPELEERQHVEVQVKVDTEHDL
SVSNANLERSFDGPNPTECDKEISAIGHGSQDHIQSSQSNQLSACAKPLSLDLAKTKSDT
VGFQAPLRHQLGNAQTHQSNNLSHNMQQQERTMAQNVQTSAQIHDQLFAQSNHGNQQYLQ
TMQGYASQMGQYYQQQLYYLQAQHNQQMQSLQQQQLPTEHLQQNFMQQVQQLNQQMVLWQ
QQVQQQQQVVLQQALPVQQLPDEKQGQCPSGDTKHDQNKQQQQAPQMDQQSQQLQQQPLL
CLQQQQQQQQQMYLIQQQQMYQQQQAQQQQLFQQQLMQQQQYVLQMPQQQQDSVQQQLFQ
QQQQQMMLLQRQQQQIMQQQIQQYLQQQQNQQGSKNQTYKSNPQEDGRNRQMEHGQLSEA
SQSDGSKLRSGEQSELSYPSTPQSQRSNH
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atggagccggaggccgatgccatggccctcgcgtcggacgccgcggcgcctgagctccca
tcgtcgcagcttgattttttcaagaccagagttcgattattatgtgatagcaacacggga
gattttgatgcttgggtatcattaataaatgctgcagagggagcatcagcagatgacata
gaagttataagcttggtataccatagcttcttgttggaatttcctttgtgctatggttac
tggatcaagtatgcagctcacaaggcacgactatgcacaaccagatatgtagtggatgtt
tatgaacaagctgtccacgctgtacctcattctgttgatatttgggtcagttactgtggg
tttggtatatgtgcatttgaagaacctgctcatatcagaagtttattcgagagggcttta
tctcttgttggaaaggactatttgtgttatcacctgtgggacatgtatatagaatttgaa
acctctcagaagcagctggttcagcttgccaccatttttatcaacacactgaaatttccc
acaaagaagttgcacatgtattatgaaagttttagaaagtttctaacattattggaacaa
gaggcgacaagttgtgttgctgaaattttatcagaagaaatgcatgcttctgaaatgata
ggcgctgaagattctgaattggatatatcaactattatttctgacttatttgaccaaaaa
ggtgggcatcttagtcctgaagcattgaagcattacttatctgctggggagaggctctac
aaaacgtccagcaagatttacaaagaaatctgttactttgaggcatccataaaaaggcct
ttttttcatgtcaatccacttgatgatgatcagcttgaaaactggcaccagtatcttgac
tttgttgagaagaatggagattttgactgggctgtaaaactttatgagaggtgcttgatc
ccttgtgctaattattcggagttttggatccgctactcagagtatgtcgatgctaaaggc
ggccgagaaattgcaaaccatgctctgggtcgagcatcatcatgttttgtaaaggaagtt
ccaactttctgcatgtattatgcgttgtttaaagagcaaattggtgatgcaccggctgcg
cgctctctttttactaaagcaagaagttacttcacttcagggttttatgcaaatattaat
aggctggccaacatggaaaaacgaatgggaaacactaaagcagcttctgagatatatgag
atagcaattgaggatgcagtgcagaagaagaacatagagttgcttcctgacctgtacagc
aattttgctcagttcatatatgcagcaagtcatagcattattgaggctaaacaagtcttt
gtcaagggaataaatcgtgcaccctgtaaaccattgattaagggattcatacagttcatg
agtacacatggagggcctaaagacatacctcttcttgattctgttatttctaatgccgtg
actccaggatctgatgtatctacagccttaagcacagaggaccgtgaagatatctcattg
ttgtttttggagtttgttgacctctatgggggtattaaagaactcagaaaggcgtgggct
cggcatagtaaactgtttcctcacagcactgggaacatttcacggcattattctactatg
gggaatagccttcaagacactaacaagaggagaaaaacagaaccgttgatggttgctcgt
gatcaatccttagaagatacaatcgaactgaaacagccacccaaaactgatgatttttct
cttatagttgataaagagagtgaaccacaagtggataaggacattgtggattcaggaaaa
ggacatagggatgcaggagagcagaaagctttagagattgtcaattcacataaagagacc
atcaggacagctcaggaatgcactgacatggttcacagtgaacatatcctggacaaaaat
ggaatgcaaaagcaaatgaattcacatgccaaagaagagagtaatcaagatctaatgttg
catgaacaaaatgatgagaaaacaaattctcgtgcggcggaggctcctgtagctgagtca
ggtgactgtgattctccttccaaagcaattgctagctctgagaacatcaattctgagggc
aaggtcattgaggtatctgcaagcagccatctagaaacagtatgctcaaaatatgacttg
ccgtctggatcaaacatgcacaatgaaggaaattcttctggtccagctcgaatatctcca
gagctggaggaaaggcaacatgtggaggttcaggtaaaagtagacacagagcatgatttg
tctgtcagtaatgcaaacctagagaggtcttttgatggtccaaatccaactgaatgtgac
aaggaaatctctgccattggtcatgggagtcaagaccatattcaatcttcgcagtcaaat
caactctcagcctgtgcaaaacctttgagcttggacttagcgaaaacaaaatcggatact
gtcggttttcaagctccacttcgacaccagttggggaatgctcaaacacatcaatctaat
aacctttcacataacatgcaacagcaagagcgtactatggctcagaatgttcaaacatct
gcacaaattcacgaccaattatttgcacagtctaatcacggaaaccaacagtatctccaa
acgatgcaagggtatgcatcacaaatggggcaatattaccagcaacaactgtattacctg
caggctcagcacaatcaacagatgcagagtctgcaacagcaacagcttccaactgagcat
cttcagcaaaattttatgcagcaagtacaacagctgaaccagcaaatggtactttggcag
caacaagtgcagcagcagcaacaggtagtactacaacaggcactgccagtccagcaactt
cctgacgaaaaacagggtcagtgtccttctggggataccaaacacgaccaaaataaacag
cagcaacaagcacctcaaatggatcaacaaagccagcagttgcagcaacaaccgcttctt
tgtctccagcaacagcagcagcagcaacaacaaatgtatcttatacagcagcagcagatg
tatcaacaacagcaagctcagcaacagcagctctttcagcagcagttaatgcaacaacaa
cagtatgtactgcagatgccacagcaacagcaagactcagttcagcagcaactgtttcag
caacaacagcagcagatgatgcttcttcagcgacagcagcaacagattatgcaacaacag
atccaacagtacttgcaacagcaacaaaaccaacaagggtccaagaatcagacttacaag
tcaaatcctcaggaggatggaaggaacaggcaaatggagcatgggcaactgtctgaagct
tcacagagtgatggttccaaactgcgcagcggtgaacaatctgagttatcctacccgtca
actcctcagtcacaacgctcaaatcactga
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