Miscanthus floridulus: 136499236
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Entry
136499236 CDS
T10264
Name
(RefSeq) uncharacterized protein
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
mflo Miscanthus floridulus
Pathway
mflo03015
mRNA surveillance pathway
mflo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
136499236
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
136499236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136499236
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
136499236
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
136499236
NCBI-ProteinID:
XP_066351045
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Position
13:90060856..90065087
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AA seq
603 aa
AA seq
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MDPDGDPAFHRNEAISAVQDVDQYYGDDDDFDDLYNDVNVGDGFLHASHQAPPPPPPNQQ
APPPQQHQHQQQQLPPPPQQPPPQQLHPPAHTLPPPLPQVPPPQQQVRIPGVAVPAPGIP
PAQNNLPPPPQPPAAPAPPPPQHHQIQQGDGINRPGGNFAGGPIVVGNGGPAGGGDGPGG
TTLFVGELHWWTTDADLESELSKYGPVKEVRFFDEKASGKSKGYCQVDFYDPGAAAACKE
GMNGHAFNGRPCIVAFATPNSVRRMGEAQVKSQQAMAAQTSNMQPKGGRGGGGAAGPQVG
GNYGGGRGGTVGPGAGGGAGGGGGNWGRGGGGMGNRGPVGNMRNRMGPAGGGRGIMGNGG
MVAPPPPMMPPGGMLGQGFDPAGYGAMGRMGGGFGGFPGGPGAMPFPGLMQPFPPVVAPH
VNPAFFGRGGMGAGGMWPDPNMGAWGGEEQSSYGDDAASDQQYGEGGSHGKERPPEREWS
GAPERRREREKDAPPAQEWPERRHRDERDMDRERNRDYDRDRERDRDRERDRDRDRERDR
DRERERERDRERHRDDRDRYGDYHRHRDRDSERNEDWDRGRSSGIRSRSREADHSKRRRM
TPQ
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggaccccgacggcgacccggcgttccaccgcaacgaggccatctccgcggtccaggac
gtcgaccagtactacggcgacgacgacgacttcgacgacctctacaacgacgtcaacgtc
ggggacggcttcctccacgcctcccaccaggcgccgccgccgccgcctccgaatcagcag
gcccctccgccgcagcagcaccagcaccagcagcaacagctccctccgccgccccagcag
ccgccgccgcagcagctgcatccgccggcccacaccctcccaccaccgctgccgcaggtc
ccaccgccgcagcagcaggtacgcatcccgggggtggccgtccctgctcctggcatacct
cccgcccagaacaacctccctccgccgcctcagccgccggccgcgcccgcgcctccgccg
cctcagcaccaccagattcagcaaggagatgggatcaaccgccctggaggtaacttcgcc
ggcggccccatcgtggtcgggaacggtggccctgctggtgggggtgacggtcctggcggc
acgacgctgttcgtgggggaactccactggtggacgacggacgcggatctggaatctgag
ctcagcaagtatggtccggtcaaggaggtgaggttcttcgacgagaaggccagtggcaag
tccaagggctactgccaggtcgatttctatgaccctggtgcagctgctgcctgcaaggag
ggcatgaacgggcacgcgtttaatggccgtccatgtattgtggcattcgccacaccgaac
tccgttcgtcgcatgggcgaggcgcaggtgaagagccagcaggctatggctgcacagaca
tcgaatatgcagccgaagggtggtagagggggcggtggtgccgcagggccacaggtgggt
ggtaattatggtggaggccgtggaggaactgttggacctggtgccggtggtggagcaggt
ggaggcggtggaaattggggaagaggtggtggaggcatggggaatagaggccctgttggt
aatatgaggaataggatgggcccagctggtggcggccgtgggataatggggaatgggggg
atggttgcaccgccaccaccaatgatgccgccgggtggaatgctggggcagggttttgat
cctgctggttacggtgctatgggaaggatgggtggtggatttggcggttttcctggtgga
ccaggggctatgccattccctgggctgatgcaaccattcccgccggtggttgctccacat
gttaacccagctttctttggtcggggcggaatgggtgccggtggaatgtggcctgatccc
aacatgggagcctggggtggggaggaacaatcaagttacggggatgacgcagcttctgat
cagcagtatggagaaggagggagccatgggaaagagaggccaccagagagggagtggtct
ggtgcaccagagaggaggcgtgaaagggagaaggatgcgccccctgcacaggagtggcca
gagaggaggcaccgggatgagcgtgacatggaccgagagaggaatcgtgactatgacagg
gacagggaaagagaccgtgacagggaaagagaccgagatcgagacagggagagggacaga
gatagggagagagagagggagagggacagagagaggcatagggatgacagagatcgctat
ggcgattatcacaggcacagggatcgtgattcagaacgtaatgaggactgggacaggggg
aggtcttctgggatacgcagcaggtcaagggaggctgaccactctaagcgcaggcggatg
acacctcagtag
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