Miscanthus floridulus: 136499411
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Entry
136499411 CDS
T10264
Name
(RefSeq) putative tRNA pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mflo03016
]
136499411
Enzymes [BR:
mflo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
136499411
Transfer RNA biogenesis [BR:
mflo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
136499411
Prokaryotic type
136499411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
136499411
NCBI-ProteinID:
XP_066351174
LinkDB
All DBs
Position
1:complement(157997963..158003186)
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AA seq
518 aa
AA seq
DB search
MAAAAAASASWLLRRSISSAFLARRAGPSILRTTLCYSSSASACPKPTPSLPPPDTSDND
GGGGGMRWESARKKRVVLRIGYVGTDYRGLQKQRELGVDSTIESVLESAIFKSGGILESN
YGKLQKVGWERSSRTDKGVHSLATMISLKMEIPDRAWEDDPDGIALASIINSNLPDNVRV
FSILPAQRSFDVRRECLYREYFYLLPAEVIGIKDGYSPEEMQEHLSEFNSILKGFEGNHP
FHNYTARAKYRKVLAGRHRRVKGASSMLKSMSSEMGMAESSSEESTSSDHDEDLNISSII
DTGASEDNCVNDILKLSENRVQIQARWLHEPDESDRLNASHFRDIITCSCGELQTSSGIQ
FVELTLCGVSFMLHQIRKMVGTAVAVKRGLLPKDIIELSLAKFSRIVLPVAPSEVLILKD
NSFCTKSKEGRILRPGIQSMNKSAAIRKGVEEFYKAALLPEVAKFLGPSMPPWKEWLENL
DRFAGIPDSQLDEVREAYRAWKADYDRVKMARKSASSV
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgccgccgctgcgtcggcgtcgtggcttctccgtaggtctatatcctccgca
ttcctcgccaggcgcgcgggccctagcatcctgcgtacaaccctctgctattcctcctcc
gcatccgcctgccccaaaccaacgccgtcactgcctccgccggacacatccgacaatgat
ggcggcggcggcgggatgaggtgggagtctgcgcgcaagaagagggtggtgctccgcatc
ggctacgtaggcaccgattaccgagggcttcaaaagcagcgagagcttggcgtggattcg
accattgagtcagtcttggaatctgccatcttcaagtcaggcggaattcttgagagtaat
tatggaaaactgcaaaaggttgggtgggaaaggagtagccgaactgataaaggggtacac
tcattggctacaatgatttcccttaaaatggaaatccctgatagagcatgggaggatgat
cctgatggtattgctcttgccagtatcatcaactcaaatttgccggacaatgtgagggta
tttagtatcttgcctgcgcaaaggagttttgatgtaaggagggagtgcttgtaccgtgag
tacttctatcttcttcctgctgaagttattggaattaaagatggttatagccctgaagaa
atgcaagagcacttgtcagagttcaacagcatactgaaaggtttcgagggaaaccatcca
tttcataattacacagcacgtgccaagtataggaaggtcctcgcgggaagacaccgaagg
gtgaaaggagcaagctcgatgttgaagtccatgtcctccgaaatgggtatggcagaaagc
tcttctgaagaaagcacttcttcagatcatgatgaggacttgaatatttcatcaatcatt
gacactggtgcatcagaggacaattgtgtgaatgatattctgaaactttctgagaatcgg
gtgcagattcaagctaggtggctgcatgaacctgatgaaagtgatagattaaatgcttca
catttcagagatatcattacctgttcctgtggagagttgcaaacttcatcaggaattcaa
tttgtggaattgacgttatgcggggtatctttcatgctacatcagatccggaaaatggtt
ggaactgccgtggcagtgaagcgtggattactacccaaagacatcatagaactgtctctt
gcaaagttttctagaatcgtgctaccagtagccccttcagaagttctgatccttaaggac
aatagtttctgcacgaagagcaaggaagggagaatccttcgccctgggatccagtcaatg
aacaagtcagcagcaatcaggaagggcgttgaggaattctacaaggcggctcttctgcca
gaagtagcgaaattcttgggcccctcaatgccgccatggaaagaatggctggagaacttg
gacaggtttgctggcataccagattcacagctggacgaagttagggaggcctacagagca
tggaaggctgattatgaccgcgtgaagatggctagaaagagtgctagcagtgtctaa
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