Miscanthus floridulus: 136500219
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Entry
136500219 CDS
T10264
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 24-like
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
mflo Miscanthus floridulus
Pathway
mflo03040
Spliceosome
Brite
Enzymes [BR:
mflo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
136500219
Spliceosome [BR:
mflo03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
136500219
Complex B
136500219
Complex C
U2 SnRNP specific factors
136500219
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Other DBs
NCBI-GeneID:
136500219
NCBI-ProteinID:
XP_066351688
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Position
1:complement(162944782..162949912)
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AA seq
766 aa
AA seq
DB search
MSKRSKLEGFSIPRPTSYNFERSQPVQRLYRPTDDPDLDDNAFSDDAPSDVPASTAVEGK
AEDEEEIDPLDAFMAEIQEEIRAPPPPLKPEALRRADSDDDEDDPVESFLRAKKDAGLTL
AADAMRAGYDSDEEVYAAAKAVDAGMMEYDSDDNPIVVDKKKIEPIPALDHSTIEYDAFT
KDFYEEKPSISGMSDQEVADYMKSLAIRVSGFDVPRPINFFQDCGFPVPLMNAIAKQAYE
KPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELDKEEGPIGVICAP
TRELAHQIYLEAKKFAKPYNLRVAAVYGGVSKFDQFKELKAGCEVVIATPGRLIDLLKMK
ALKMFRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPYKVERLAREILT
DPIRVTVGQVGGANEDIKQVVNVLPSDVEKMPWLLEKLPGMVDDGDVLVFASKKARVDEM
EKELNQRGFRIAALHGDKDQASRMETLQKFKSGTYHVLVATDVAARGLDIKSIKTVVNFD
IAKEMDMHIHRIGRTGRAGDKDGTAYTLITQKEARFAGELVHSLIAAGQDVPNELMDLAM
KDGRFRAKRDSRKGGKKGGKGKGGGGGAGRGRGVRGVDFGLGIGYNAESGSQVPAPRSAA
VNSLKTGMMQQFKSSFVSGSSNTPSSNAPSFVRPALRGFVSGGTIGGDARPAQSAPTFVP
ASRPAQPAPSVPASRPEGNNNENGNSNPESSRDRSRERKRPSGWDR
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagcgctcgaagctcgagggtttcagcatcccgcggcccacctcctacaacttc
gagcgctcgcagcccgtgcagcggctctaccgtccgaccgatgacccggacctcgacgac
aacgccttctccgacgacgccccctcagatgtccccgccagcaccgcggtggaaggaaag
gcggaggatgaggaggagatcgacccgctcgacgccttcatggccgagatccaggaggag
atccgcgcgcctcccccgccgctcaagcccgaggcgcttcgccgcgcggactccgacgat
gacgaggatgaccccgtcgagagcttcctgcgggctaagaaggacgccgggctcacgctg
gccgccgacgccatgcgcgctggttacgactccgacgaggaggtctatgccgctgccaag
gccgtcgacgccggcatgatggaatacgactccgatgacaaccccatagtcgtcgacaag
aagaaaatagagcccataccagcactcgatcactcgaccattgagtatgacgccttcacc
aaagatttctacgaggagaagccgtcgatttcaggtatgagtgaccaagaggtagcagat
tatatgaaaagtttggcaattcgggtttctggttttgatgtgccaaggccaataaatttt
tttcaggattgtgggtttcctgtaccgctaatgaatgctattgccaagcaagcttatgaa
aaaccaactacaattcagtgccaggctttacctattgtactttcaggcagagatatcatt
ggtattgcaaaaactggttctggcaaaactgcagcttttgtgctccctatgattgttcat
attatggatcagcctgagcttgacaaagaagaaggtccaataggagtcatttgtgctcca
acaagagaattggcacatcagatatatctcgaagctaagaagtttgcaaagccttacaac
cttcgagttgctgctgtatatggtggtgtttccaaatttgaccagtttaaagaactgaaa
gcaggctgtgaagtagtcattgcaactccagggagattaatagacttgctgaagatgaag
gcattgaagatgttcagggcaacttatctggttcttgatgaagctgatcgcatgttcgat
cttggatttgagccacaaatacgatccattgttggtcaaattagaccagatcgacaaacc
ttacttttttctgcaacaatgccatacaaagtagagcgtttggcaagagaaatattgact
gatcctattagagttacagttggtcaagttggcggtgctaatgaagacattaaacaagtt
gttaatgtactcccttctgatgttgagaaaatgccttggcttttggagaaattgcctgga
atggttgatgatggagatgttcttgtattcgcatctaagaaggctagagtggatgagatg
gagaaagagttgaatcagagaggattcagaattgcagcacttcatggtgacaaggatcaa
gcttctcgcatggagaccctgcagaagttcaaatctgggacatatcatgttctggttgca
actgatgttgctgcacgaggtcttgacatcaaatcgattaaaacagttgtcaactttgat
atcgcaaaagaaatggatatgcatattcaccgaattggaagaactggtcgtgctggtgat
aaagatggcactgcatacactctgattacacagaaggaagcacgctttgctggtgaactg
gttcacagtttgattgctgctggccaggatgtacccaatgaactcatggatctggctatg
aaggatggaagattcagagcaaaacgggactccaggaaaggtgggaagaaaggtggcaaa
ggaaaaggtggtggtggaggtgctgggcgcggtcgtggtgtgcgtggagttgattttggc
ctcggcataggttacaatgctgaatctggttcgcaagtgcctgctccaagatctgctgct
gtaaattcgctgaagacaggaatgatgcagcaatttaagagcagctttgtctctggatct
tcaaatactccaagcagcaatgcaccttcctttgtaagaccagcactccgtggctttgtg
tctggcggcaccattggaggagatgcgcggcctgcacagtcggcccccactttcgtccct
gcatcccggccagcacagcctgccccctcagtccctgcatcccggcctgaaggaaacaac
aatgaaaatgggaactcaaatccagaaagttcacgggatcggtccagggagagaaaacga
ccatcaggttgggatcgttag
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