Miscanthus floridulus: 136500888
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Entry
136500888 CDS
T10264
Name
(RefSeq) homeobox-leucine zipper protein ROC1-like
KO
K09338
homeobox-leucine zipper protein
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mflo03000
]
136500888
Transcription factors [BR:
mflo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
136500888
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
DivIC
MRP-L20
TUSC1
HTH_Tnp_1
DciA_cyano_C
Motif
Other DBs
NCBI-GeneID:
136500888
NCBI-ProteinID:
XP_066352449
LinkDB
All DBs
Position
13:25040977..25045442
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AA seq
668 aa
AA seq
DB search
MTPARRMPAMIGRNGMAFGSSSALSLSQADLLDSHHLQQAFQQQLFDQIPATAVDSSDNI
IHGRSDTLVADEFESKSCSENPDGTSGDDGQEDPNQRPNKKKRYHRHTQHQIQEMEAFFK
ECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERQENAQLRAENDKLRAENMR
YKEALGTASCPSCGGPAALGEMSFDEHHLRLENARLRDEIDRISGIAAKHVGKPMVSFPV
LSSPLGAAAARSPLDLAGAYGVQPAGLGADHLFGVGAGAGDLLRSVSTGQLDADKPMIVE
LAVAAMDELLRMARLDAPLWGGGVAGVQLDEEEYGRMFLGGLGPRQYGLRPEASRDNAVV
IMTRDSLVEILMDANRFAAVFSSIVSRASTHEVLSTGVAGSYNGALQVMSMEFQVPSPLV
PTRESYFVRYCKNNPDGTWVVVDVSLDSLRPSPVMKCRRRPSGCLIQEMPNGYSKVTWVE
HVEVDDRSVHNLYRPLVNSGLAFGAKRWVGTLDRQCERLASAMASNIPNGDLGVITSIEG
RKSMLKLAERMVASFCGGVTASAAHQWTTLSGSGAEDVRVMTRKSVDDPGRPPGIVLNAA
TSFWLPVPPKRVFDFLRDETSRSEWDILSNGGAVQEMAHIANGRDHGNCVSLLRVNVSAH
SCLFFQKK
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgacgccggcgaggcgcatgccggcaatgatcggccggaatggcatggcgtttgggtcc
tcgtcggcgctgtctttgagccaggctgacctcctagacagccatcacctgcagcaagcg
ttccaacagcaactctttgatcagatcccagccaccgcagtggatagcagcgacaacatc
atccatggtcgctcagacacgctggtagcagatgaatttgagagcaagtcctgcagcgag
aatcccgatggcacctctggcgatgatggccaggaagaccccaaccagcggccaaacaag
aagaagcggtatcaccgccacacccagcaccagatccaagagatggaggcgttcttcaag
gagtgcccgcatccggatgacaagcagagaaaggagctcagccgggagctcggcctcgag
ccgctgcaggtgaagttttggttccagaacaagcgcacacagatgaagaaccagcacgag
cggcaggagaacgcgcagctgcgtgcagagaatgacaagctgcgagctgagaatatgcgg
tacaaggaggcgctcggcacagcctcctgccccagctgtggcggccctgccgccctcggt
gagatgtcctttgacgagcaccacctccgtcttgagaatgctcgcctccgtgacgagatt
gaccgaatctcgggcatcgctgccaagcacgtcggcaagcccatggtctccttcccggtg
ctctccagcccgcttggtgccgctgccgcccgatccccacttgaccttgctggtgcctac
ggcgtccagcctgctggcctcggcgctgaccacctattcggtgttggagctggtgctggc
gatctgctgagaagcgtgtcaaccggccagctcgacgctgacaagcccatgatcgtagag
ctggccgttgctgccatggacgagctcctccgaatggcgcggcttgatgcgccgctgtgg
ggtgggggtgtggcaggggtgcagctggacgaggaggagtatggtcggatgttcctgggt
gggctcgggccgaggcagtacggactccgtccggaggcatctcgagacaatgccgtcgtg
atcatgacacgcgacagccttgttgagatactcatggacgcgaaccggttcgctgcagtg
ttctcaagcattgtgtcgagggcttctacacacgaggtgttgtcaactggtgtggcaggg
agctataatggtgcattacaagtgatgtcaatggagttccaggtgccgtcaccgctggtg
ccgacgcgggagagctactttgtgaggtactgcaagaacaatcctgatggaacgtgggtt
gttgtcgatgtgtcactcgacagcctccgccctagccctgttatgaagtgccggcgcagg
ccatcaggatgccttatccaagaaatgcccaatggctactcaaaggtgacctgggtggag
cacgttgaggttgatgacagatcagtgcacaatctctacaggcctttggtcaattcaggc
ctcgcatttggtgcaaaaaggtgggttggcacactggaccgacagtgcgagcgccttgcc
agtgccatggccagtaacatccccaacggcgacctcggtgtgatcacaagcatagagggg
aggaaaagcatgctgaagctagcagagaggatggtggcgagcttctgcggtggcgtgaca
gcatctgccgcgcatcagtggacaacattgtcagggagtggtgctgaggacgtccgcgtt
atgaccaggaagagcgtggacgacccaggcaggccgccaggcatcgtcctcaatgccgcc
acctccttctggctacccgtcccgcccaagagggtctttgacttcctccgcgatgagacc
tctcgcagcgagtgggacatcctatccaacggtggtgctgttcaagaaatggctcatatt
gccaacggccgggaccatggcaactgtgtctcccttcttcgcgtcaatgtaagtgctcat
tcgtgccttttctttcaaaaaaaataa
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