Miscanthus floridulus: 136501192
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Entry
136501192 CDS
T10264
Name
(RefSeq) uncharacterized protein
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
mflo Miscanthus floridulus
Pathway
mflo03015
mRNA surveillance pathway
mflo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
136501192
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
136501192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136501192
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
136501192
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
136501192
NCBI-ProteinID:
XP_066352782
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Position
13:87978760..87982232
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AA seq
584 aa
AA seq
DB search
MDPDGDPAFHRSEAISAVQDVDQYYGEDDDFDELYNDVNVGDGFLLNSHPPPPPQHAPPP
QQNHHQQQQQLPPPPAQLNHHQQQQLPPPPLPQPQQPPPPPPHPPPQQQVYAPAVAAPSP
SQPPPQPNLPPPPGPAPTPPQHHQIQQGDGFHRPGGNYSGGPVVVANGAGVGGGDGPGGK
TLFVGDLHWWTTDADLEAELSMYGPVKEVRFFDEKASGKSKGYCQVDFYDPAAAAACKEG
MNGHSFNGRPCVVAFASPHTVRRMGEAQVKIQQALAAQTSSVQPKGGRGGGGAGMPHAAG
NYSGGRGGGAVSGGGGGGNWGRGGGGGRGPVGNMRNNRMGPAVGRGIGNGMVAPPPPMLP
QGGMLGQGFDPGFGAMGRMVGGFGNFPVGPGAGPFPGMMQPFPPVVAPHVNPAFFGRGGM
GAGGVGMWPDPSMGAWGAEEQSNYGDDAASDHQYGEGGSHGKERPPEREWSGASERRRDR
EKDMPPEQEWPERRHRNEHDMGRERDRDYDRDRERDRDRERDRDRERDRDRERHKDDRDR
YGDYHRHRDRDSERNEDWDRGRSSGIPSRSREADHSKRRRMTPQ
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggaccccgacggcgacccggcgttccaccggagcgaggccatctccgccgtgcaggac
gtcgaccagtactacggcgaggacgacgatttcgacgagctctacaacgacgtcaacgtc
ggcgacggcttcctcctcaactcccacccgccgccgccgccccagcacgccccgcccccg
cagcagaatcaccaccagcagcagcaacagctccctcctccgcccgcgcagctgaaccac
caccaacagcagcagctccctcctccgcccctgccgcagccgcagcagcccccgccgccg
ccgccgcaccccccgccccagcagcaggtctacgcgcctgctgtggcagcgccgagtccg
agtcagccgccgccccagccaaatctcccgccgccgcccgggcccgcccccacgccgcct
cagcaccaccagatccagcagggcgacgggttccaccggccgggagggaactacagcggc
ggtcccgtcgttgtcgccaacggagccggcgttggtgggggcgatggccccggcggcaag
acgctgttcgtcggcgacctccactggtggacaaccgacgctgatctggaggcggagctc
agcatgtatgggccggtgaaggaggtcagattcttcgacgagaaggctagcggcaagtcc
aaggggtactgccaggtcgacttctacgaccctgccgccgccgctgcctgcaaggagggc
atgaacggccactcgtttaatggccgtccatgtgttgtggcattcgcgtctccccatact
gtgcgccgcatgggcgaggcgcaggtgaagatccagcaggccttagctgcacagacatca
tcggtgcaaccaaagggtggtagagggggtggtggtgctggaatgcctcatgctgctggt
aattacagtggtggacgtggaggaggtgctgtatccggaggcggtggtggtgggaactgg
ggtagaggtggtggtggaggtagaggccctgttggtaatatgaggaacaatagaatgggt
ccggcagttggccgtggaattgggaacggcatggttgctccaccacccccgatgctgcct
caagggggcatgctgggccaggggtttgatcctggttttggtgcaatgggaaggatggtt
ggtgggtttggtaacttccctgttggaccaggtgctgggccgtttcctgggatgatgcaa
ccatttcctccagttgttgcaccacatgtaaacccggccttctttggtcgtggtggaatg
ggggctggtggggtggggatgtggcctgatcccagcatgggggcttggggtgcggaagaa
caatcaaattatggggatgatgcagcatctgatcatcagtatggggaagggggaagccat
gggaaggagaggccaccagagagggaatggtctggggcatcagagaggagacgggacaga
gagaaagatatgccccctgaacaggagtggccagagaggaggcatcggaatgagcatgac
atgggccgagagagggatcgtgattatgacagagacagggaaagagaccgtgacagagag
agagaccgagacagagagagggacagagatagggagaggcacaaggatgacagagatcgt
tatggtgactatcacaggcacagggatcgtgattcagagcgtaatgaagactgggacagg
gggaggtcatctgggataccgagcaggtcgagggaggctgaccattctaaacgtaggcgg
atgacacctcaatag
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