Miscanthus floridulus: 136502078
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Entry
136502078 CDS
T10264
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2-like
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
mflo Miscanthus floridulus
Pathway
mflo03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
136502078
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mflo01002
]
136502078
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mflo04121
]
136502078
Enzymes [BR:
mflo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
136502078
Peptidases and inhibitors [BR:
mflo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
136502078
Ubiquitin system [BR:
mflo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
136502078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-UBP
Motif
Other DBs
NCBI-GeneID:
136502078
NCBI-ProteinID:
XP_066353664
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All DBs
Position
13:83191768..83197486
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AA seq
762 aa
AA seq
DB search
MGKTPPKEKEADGSPRKKAARVDDPALITASALSPTGKTPPKGEEAEESPRKKAPRLDDA
ALATVPGASKPNPTGKTQPKEEAEGSPPKRSRSPRSKSPRRQDKRPAAALPLPTVPESSE
LIVEGAARASDEKRCKCNHVITYSAIMKMARLLESKDAWTCCGCQREKDKGIVKTKPEKI
DLLICVTCYDHLCCGVGSIAYPFGHSRAHALKKKHWFAVLYCDPERGYCFKCNAEVPMPV
KFGEGDNEVGVQVIRSIVSRKLLAPPPSVGQTEAEVNPMVEMTGKGQAESHPSGFGLDLA
DKWPSYESRSSDAQGYAIRGIPNLGNTCYMSAVLQCLFVLGKLQERMLALDPPKGLLPEL
LKELFVLVEASAAGDVLDPTKVLDCVRLCKAPFFKVGAMEDSHEFLTALRGIWIEGEKIY
NRQSDAPTVIDSIFRFKMLQTLSCKKCGHSSPTSDFFWDLTMHFPSKWHPTKSAASPQTS
ESPRSRKREIAVQLFPADVQRNLERLQTVSESCYSRAIGSEVTVEETHKPLEVDSTQAQC
ISQSQDVVQSPLQIQEGKSVDSLTEDLISIEDFLLLFSEDQVKWRCPNCAKDHEEPSASQ
SKNGEQIVGSGNEDDVGDTVKIYRFTTLPPVLALHLNRTSNLKGTDGIKINGHVRFMEYL
DVKRFMNPSSVDKDSTLYRLAGVVEHIGEGSLKEKDGHYIAYVRARRLGNQQEGSSCSSS
WFCADDRWIRQVTLEQVLNCEAYILFYERMEDQDISGIRRQN
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggggaagacgcccccgaaggaaaaggaggcggatggaagcccccggaagaaagctgcg
cgggttgacgacccggctctgattacggcgtcggcactgagccccacagggaagacgccg
ccgaagggggaggaggcagaggagagcccgcggaagaaagctcctcggctggacgacgcg
gctctggctacggttcctggggcgtcgaagccgaacccgacggggaagacgcagccgaag
gaggaggcggagggaagcccgccgaagagatctcgaagcccgcggagtaaatctccgcgg
cggcaagacaaacggcccgcggcggcactgcctctgcctacggttcctgagtcgtcggag
ctgatcgtggaaggggcggcgcgggccagcgatgagaagcggtgcaagtgcaatcacgtc
atcacttacagtgctatcatgaaaatggctcgattgctcgaatccaaggacgcatggact
tgctgtggttgtcagcgcgaaaaagacaaggggatcgtcaaaaccaagcccgagaagatc
gatctcttgatctgtgtgacatgctacgaccatctctgctgcggggttgggtcaattgct
tacccgtttgggcactctcgagcacacgccctgaagaagaagcactggtttgctgttctg
tactgtgatccagaaagaggatactgcttcaagtgtaacgctgaggtgccaatgccggtc
aaatttggggaaggtgacaacgaggttggtgttcaagtgatccgctctattgtcagtcga
aagttactggctcccccgccatctgttggtcaaactgaggcggaggtcaatccaatggtg
gaaatgacgggcaaaggtcaggcagaaagccatccatctggatttggtttggatcttgca
gacaaatggcctagctatgagtccaggtcatcggacgcgcaaggctatgctatcagagga
ataccaaatctcggaaacacatgctacatgagtgcagtattgcagtgcctatttgtgctt
ggtaagctgcaagaaaggatgttggcactggatcctccaaaaggtctccttcccgagcta
ctcaaggagctatttgtgcttgtggaggcaagtgctgcaggagacgtgctggacccaacg
aaagttttggattgcgtacgcttgtgcaaagcgccgtttttcaaagttggagctatggaa
gacagccacgaatttcttacggccttgcgcggtatttggattgaaggtgagaagatttat
aacaggcaaagtgatgctcctacagtgattgattccatttttaggtttaagatgcttcag
acactatcctgcaaaaaatgtggtcactcgtctccgacatccgattttttctgggacctg
acaatgcatttcccatcaaagtggcatccaaccaaaagtgctgcatcaccacaaacaagc
gagagtcccagatctcgaaagagggagattgctgttcaattatttccagcagatgtgcag
agaaacttggaaaggttgcaaacagtttctgaaagttgttattctcgtgctattggttca
gaggtgactgtggaggaaacacataaacctttggaagttgattctactcaagcgcaatgt
atcagtcaaagccaggatgttgtacagagtcctttgcagattcaggagggcaagtctgtt
gattcactgacagaagatctaatatcgattgaagacttcttattgctgttttctgaagat
caggtaaaatggcgctgtcctaattgtgccaaggatcatgaggagccaagtgccagtcaa
agtaaaaatggtgagcagatagtgggaagcggcaatgaagatgatgttggagatactgtt
aagatttatcgttttaccacgcttccacctgtattggctcttcaccttaatagaacttct
aaccttaagggaactgatgggatcaaaataaatggccatgtgagatttatggaatacctt
gatgtaaagcgattcatgaaccccagctctgtcgacaaagatagcaccctctatcgtcta
gctggtgttgtagagcacattggcgagggatccttgaaggagaaggacggacactacatt
gcgtacgttagagcaagaaggcttggaaatcagcaagagggtagcagttgctcttcctca
tggttttgtgcagacgaccgttggatcagacaagtcactcttgaacaagttctcaactgt
gaggcctatattcttttctatgagaggatggaagaccaagacatttctggcataagacgt
cagaactaa
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