Miscanthus floridulus: 136502878
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Entry
136502878 CDS
T10264
Name
(RefSeq) protein HEAT STRESS TOLERANT DWD 1-like
KO
K14848
ribosome assembly protein RRB1
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mflo03009
]
136502878
Ribosome biogenesis [BR:
mflo03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
136502878
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
Beta-prop_CAF1B_HIR1
WD40_Prp19
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML_2
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_WDR19_1st
CAF1C_H4-bd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_Vps41
NBCH_WD40
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
WD_LRWD1
Rrn6_beta-prop
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
136502878
NCBI-ProteinID:
XP_066354228
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All DBs
Position
14:complement(11849447..11854507)
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AA seq
479 aa
AA seq
DB search
MGRNIKKAKKAKSKKSKKKTEASSSSNPAVASGPAKVWQPGVDALEDGEELQFDPEAYNY
LRGFGIGWSCLSFDVVRDQLGLVRSEFPHTFYGVAGTQAEKASWNYIGVFKLSNIIGKKR
EPIPASAVDGDTDVDSDSSSDEEDEEINEDTKPILHLKKVAHAGCVNRIRSMTQKPYICA
TWGDTGHVQVWDLSSFLNSLAESGTAAPKEDDIIHKHLPVKVFSGHKDEGYAIDWSPLVT
GRLVSGDCNKCIHLWEPTSNNWNVDSNPFVGHSASVEDLQWSPTEADIFASCSVDGTISI
WDIRTGKKPCISVKAHKADVNVISWNRLASCMIASGCDDGSFSVRDLRSIQEDSLVAHFE
YHKKAITSIEWSPHEASSLAVTSEDHQLTIWDLSLERDAEEEAEFRAKMKEQANAPEDLP
PQLLFAHQGQRDLKELHWHPQIPSMIISTAIGGFNVLMPSNIDTTIPGSTDTAMASAEP
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgcaacatcaagaaggccaagaaggccaaatccaagaagtctaagaagaaaact
gaagcgtcctcgtcgtccaatcctgcggttgcctctggtccggctaaggtctggcaaccg
ggtgtagatgcacttgaagatggggaggagctgcagtttgatcctgaggcttacaattat
ctccgaggttttggcattggctggtcttgcttgagttttgatgttgtgcgggatcaactt
ggactcgtccgatcagagttcccccatacattctatggtgttgctggaacacaggctgag
aaagcttcatggaattatattggcgttttcaagctttctaacataattgggaagaagcgg
gaacctataccagcttcagcagttgatggcgacactgatgtggatagcgacagcagcagt
gatgaagaagatgaagaaattaatgaggatacaaagcccatcctacatctaaaaaaggtg
gctcatgcggggtgtgtaaatcgtatacgctcgatgactcaaaaaccatatatatgtgct
acatggggagatactggtcatgttcaggtttgggacttgagctccttccttaattcttta
gcagagtcagggactgctgcacccaaagaagatgacataatccacaaacacctacctgtg
aaagtatttagtggccataaagatgagggatatgccattgattggagtccacttgttact
ggaagacttgtttctggtgactgcaataagtgcattcacttatgggaaccaacatcaaac
aactggaacgtagattcaaacccatttgttggacactctgcaagtgttgaagatctacag
tggagtcccacagaagccgacatatttgcctcttgttctgtggatggtacgatatcaata
tgggatatacgtacagggaagaaaccttgtatttctgtcaaagctcataaagccgatgtg
aatgttatctcatggaacaggcttgctagctgcatgatagcttctgggtgtgatgatggc
agtttctcagttcgtgatcttagatcaattcaggaggactcattggtagcacattttgag
taccacaagaaagcaattacatctatcgagtggagtccacacgaagcatcatcattagct
gtaacatctgaagatcatcaactaacaatctgggacctttcattggaaagagatgcagaa
gaggaggctgagttcagagcgaagatgaaagagcaggcaaatgcacctgaggatttgcca
ccacaacttctttttgctcatcagggccagagagacttgaaagaactgcactggcaccca
cagataccgtcaatgatcatatcaacggcaattggcggcttcaacgtgctgatgcctagc
aacattgatacaaccattcctggcagcactgatacagcaatggcatctgctgagccataa
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