Miscanthus floridulus: 136503012
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Entry
136503012 CDS
T10264
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mflo Miscanthus floridulus
Pathway
mflo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
136503012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136503012
03110 Chaperones and folding catalysts [BR:
mflo03110
]
136503012
03029 Mitochondrial biogenesis [BR:
mflo03029
]
136503012
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mflo04147
]
136503012
Enzymes [BR:
mflo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
136503012
Messenger RNA biogenesis [BR:
mflo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
136503012
Chaperones and folding catalysts [BR:
mflo03110
]
Heat shock proteins
HSP60 / Chaperonin
136503012
Mitochondrial biogenesis [BR:
mflo03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
136503012
Exosome [BR:
mflo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
136503012
Exosomal proteins of other body fluids (saliva and urine)
136503012
Exosomal proteins of breast cancer cells
136503012
Exosomal proteins of colorectal cancer cells
136503012
Exosomal proteins of bladder cancer cells
136503012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
136503012
NCBI-ProteinID:
XP_066354328
LinkDB
All DBs
Position
1:174974399..174978612
Genome browser
AA seq
588 aa
AA seq
DB search
MSRMAAPSPPLSMKPPTLPFSPPKKPPPMPVYKDLHFNLDLSATKKLQAGVDLVARLLGV
TLGPKGRNVVLGNKYGPPKIVNDGETVLKEIELEDPLENLGVKLVRQAGARTNDIAGDGC
TTSIILAQGLIAEGMKVLAAGINPVQVARGIEKTAAALVSELRVMSREIEDHEIAHVAAV
SAGNDYAVGNMIYDAFQRVGRKGMVRIENGRGTENSLEVVEGMQFERGYLSPYFVTNRGN
MTVEFTDCQILLVDKKITDASEIIRILDSAVKENYPLLIIAEDVEEQAMADLIKNKLKGT
IKVAAVKAFSFGEQKTQCLDDIAIMTGGTLVRDDMGHILEKAGKEVLGFASKVVITKDST
LIVTDGSNRQAVEERVATIKGQIENSKERYNKKILGERIARLCGAIAIIQVGAQTIIEMK
DKKLRIEDALNATRAAIEEGVVVGGGCSLLRLSEKIDAIKESSLDNIEQEVGADIFKKAL
SYPTSLIANNAGVNGDFVIKKVLLNDDANYGYNASKNCYEDLMAAGILDASKVVRCCIEH
AAVVAKSFLTSDVVIVEAKEGKPIRIRPPMPPRNLIPPMPASISGIRV
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgaatggcggccccgtctccgcctctgtccatgaagcccccgacgctgcccttc
tccccgcccaagaagccaccgccgatgccggtgtacaaggacctgcacttcaacctcgac
ctctccgccaccaagaagctccaggccggagtggacctggtggcgcggttgctgggggtc
accctggggcccaaggggaggaacgtggtgcttggcaacaagtatggtcctcctaagatt
gtcaatgacggggagaccgtccttaaggagatcgaattggaagatccattagaaaatctt
ggagtgaagctggtccgacaggctggagcaaggaccaatgatattgcaggagatggttgt
accacatccataatccttgctcaaggcctcattgctgaaggaatgaaggttcttgcagct
ggaatcaatccagttcaggttgcacgtggcattgagaagactgctgctgctttggtgtct
gaactcagagtgatgtcgcgggagattgaagaccatgaaattgcacatgtggctgcagtt
agtgcggggaatgattatgctgttggaaatatgatttatgatgcttttcaaagagtaggt
agaaaaggaatggtgagaattgaaaatggaagaggcaccgagaacagtctggaggttgtg
gaaggaatgcagtttgaacgcggttacctctctccttactttgttaccaatcgtggtaac
atgacggtggagttcactgactgtcagatactattggttgacaagaaaattactgatgct
agtgagattataaggatacttgacagtgctgtcaaagaaaattatccgttgttaataatt
gctgaggatgtggaagaacaagcaatggctgatttgataaaaaacaagctgaaagggaca
attaaggttgcagcagttaaggccttctcttttggagaacaaaagactcaatgcttggat
gacattgcaatcatgacaggaggtacactagtgagggatgacatgggacatatactagaa
aaggcaggaaaagaggttcttggttttgcttctaaggtggtaatcacgaaagattcaacg
ctaattgttactgacggaagcaatcgtcaagcagttgaggaaagggttgctacgataaaa
ggccaaattgagaactctaaggaaaggtacaacaagaagatattgggtgagcggatagca
aggttatgtggtgcaattgcaatcatccaggttggtgctcaaacaatcattgagatgaaa
gataagaagctgaggattgaagatgcacttaacgcaacaagggcagctattgaggaaggt
gttgtagttggtggtggatgtagcctattaagactgtcggagaagattgacgcaatcaag
gaatcatcattggataatatagagcaggaggttggtgctgacatcttcaaaaaagccttg
agttaccctacctctctaatagcaaacaatgcaggggtgaatggcgactttgtcattaaa
aaggtgttactgaatgatgatgcaaattatggttacaatgcttccaagaactgctatgag
gacttgatggctgctggaatactggacgcatcaaaggttgtgaggtgttgcattgagcac
gctgctgtggttgctaagtccttcctcacctctgatgtggtgattgttgaggcaaaagaa
ggcaaacctattcgaataagacccccaatgcctcctaggaacttaattcccccaatgccc
gcttcaatttcaggtattcgagtgtag
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