Miscanthus floridulus: 136504199
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Entry
136504199 CDS
T10264
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
mflo Miscanthus floridulus
Pathway
mflo03030
DNA replication
mflo03410
Base excision repair
mflo03420
Nucleotide excision repair
mflo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
136504199
03410 Base excision repair
136504199
03420 Nucleotide excision repair
136504199
03430 Mismatch repair
136504199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mflo03032
]
136504199
03036 Chromosome and associated proteins [BR:
mflo03036
]
136504199
03400 DNA repair and recombination proteins [BR:
mflo03400
]
136504199
DNA replication proteins [BR:
mflo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
136504199
DNA Replication Termination Factors
ELG1-RFC complex
136504199
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
136504199
DNA repair and recombination proteins [BR:
mflo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
136504199
Check point factors
HRAD17(Rad24)-RFC complex
136504199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_22
RuvB_N
Mg_chelatase
AAA_16
AAA_14
AAA_11
AAA_24
ResIII
AAA_5
AAA_assoc_2
SLFN-g3_helicase
PhoH
nSTAND3
AAA_2
AAA_19
AAA_30
DNAX_ATPase_lid
AAA_23
AAA_28
AAA_7
AAA_25
IstB_IS21
RNA_helicase
bpMoxR
Gp44_lid
Parvo_NS1
DUF3853
Cdc6_lid
Motif
Other DBs
NCBI-GeneID:
136504199
NCBI-ProteinID:
XP_066355145
LinkDB
All DBs
Position
14:26585541..26595278
Genome browser
AA seq
339 aa
AA seq
DB search
MAPLVPMSQPWVEKYRPRQVKDVAHQEEVIRVLTNTLQTADLPHMLFYGPPGTGKTTTAL
AIAYQLYGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTARKAGYPCPPYKIIIL
DEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSS
RIMHICNEEGLNLDAQALSTLSAISQGDLRRAITYLQSAARLFGSSIASSDLISVSGVIP
EDVVKSLLAACGSGEFDVANKEVNNIIADGYPVSQLMAQFLDVIVSADDIPDDQKARICK
KLGESDKCLVDGADEYLQLLDVASETIRALFNMPQTLVF
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgctcgtgccgatgtcgcagccatgggtggagaaatatcggccgaggcaggtc
aaggatgtggctcaccaggaggaggtgattcgggtgctcacaaacaccctccagaccgcc
gatctgccgcacatgctgttctacggcccgccggggacaggaaagaccactaccgcactc
gccatcgcctaccagctctacggtccagagctgtataagtcaagggttttggagctcaat
gctagtgatgatcgtggaattaatgtggtgaggacgaaaattaaggactttgctgctgtt
gctgttggtactgcacggaaagctggttatccctgcccaccttacaagattattatactt
gatgaagcagattcaatgacagaagatgcccagaatgctttgaggcgtaccatggagact
tactccaaagtgaccagattcttttttatatgcaactatatcagcaggataatagaacca
cttgcatcgagatgtgcaaagtttaggttcaagcctctttcagaagaagtgatgagcagc
cgcattatgcatatatgtaatgaagaaggtctcaatcttgatgctcaggcgctgtccaca
ctgagtgccatttctcaaggtgatcttcgtcgtgctataacctatcttcagagtgcagct
cgcttatttggatcttctatcgcttccagtgacttgatcagtgtttcaggggttatccct
gaagatgttgtcaagtcactgcttgcagcctgcggatctggtgaatttgacgtggcaaac
aaggaagttaacaacattatagcagatggatatccagtctcacagctgatggcgcagttt
ctagatgtgattgttagcgcggatgatattccagatgatcaaaaggcaaggatatgtaaa
aagcttggggaatctgataagtgcttggttgatggggcagatgagtatctacagctgttg
gatgtcgccagtgagactattcgtgctcttttcaacatgccacaaacgctggtcttctaa
DBGET
integrated database retrieval system