KEGG   Miscanthus floridulus: 136504199
Entry
136504199         CDS       T10264                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
mflo  Miscanthus floridulus
Pathway
mflo03030  DNA replication
mflo03410  Base excision repair
mflo03420  Nucleotide excision repair
mflo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mflo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    136504199
   03410 Base excision repair
    136504199
   03420 Nucleotide excision repair
    136504199
   03430 Mismatch repair
    136504199
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mflo03032]
    136504199
   03036 Chromosome and associated proteins [BR:mflo03036]
    136504199
   03400 DNA repair and recombination proteins [BR:mflo03400]
    136504199
DNA replication proteins [BR:mflo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    136504199
  DNA Replication Termination Factors
   ELG1-RFC complex
    136504199
Chromosome and associated proteins [BR:mflo03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    136504199
DNA repair and recombination proteins [BR:mflo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     136504199
  Check point factors
   HRAD17(Rad24)-RFC complex
    136504199
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid Rad17 AAA_22 RuvB_N Mg_chelatase AAA_16 AAA_14 AAA_11 AAA_24 ResIII AAA_5 AAA_assoc_2 SLFN-g3_helicase PhoH nSTAND3 AAA_2 AAA_19 AAA_30 DNAX_ATPase_lid AAA_23 AAA_28 AAA_7 AAA_25 IstB_IS21 RNA_helicase bpMoxR Gp44_lid Parvo_NS1 DUF3853 Cdc6_lid
Other DBs
NCBI-GeneID: 136504199
NCBI-ProteinID: XP_066355145
LinkDB
Position
14:26585541..26595278
AA seq 339 aa
MAPLVPMSQPWVEKYRPRQVKDVAHQEEVIRVLTNTLQTADLPHMLFYGPPGTGKTTTAL
AIAYQLYGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTARKAGYPCPPYKIIIL
DEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSS
RIMHICNEEGLNLDAQALSTLSAISQGDLRRAITYLQSAARLFGSSIASSDLISVSGVIP
EDVVKSLLAACGSGEFDVANKEVNNIIADGYPVSQLMAQFLDVIVSADDIPDDQKARICK
KLGESDKCLVDGADEYLQLLDVASETIRALFNMPQTLVF
NT seq 1020 nt   +upstreamnt  +downstreamnt
atggcgccgctcgtgccgatgtcgcagccatgggtggagaaatatcggccgaggcaggtc
aaggatgtggctcaccaggaggaggtgattcgggtgctcacaaacaccctccagaccgcc
gatctgccgcacatgctgttctacggcccgccggggacaggaaagaccactaccgcactc
gccatcgcctaccagctctacggtccagagctgtataagtcaagggttttggagctcaat
gctagtgatgatcgtggaattaatgtggtgaggacgaaaattaaggactttgctgctgtt
gctgttggtactgcacggaaagctggttatccctgcccaccttacaagattattatactt
gatgaagcagattcaatgacagaagatgcccagaatgctttgaggcgtaccatggagact
tactccaaagtgaccagattcttttttatatgcaactatatcagcaggataatagaacca
cttgcatcgagatgtgcaaagtttaggttcaagcctctttcagaagaagtgatgagcagc
cgcattatgcatatatgtaatgaagaaggtctcaatcttgatgctcaggcgctgtccaca
ctgagtgccatttctcaaggtgatcttcgtcgtgctataacctatcttcagagtgcagct
cgcttatttggatcttctatcgcttccagtgacttgatcagtgtttcaggggttatccct
gaagatgttgtcaagtcactgcttgcagcctgcggatctggtgaatttgacgtggcaaac
aaggaagttaacaacattatagcagatggatatccagtctcacagctgatggcgcagttt
ctagatgtgattgttagcgcggatgatattccagatgatcaaaaggcaaggatatgtaaa
aagcttggggaatctgataagtgcttggttgatggggcagatgagtatctacagctgttg
gatgtcgccagtgagactattcgtgctcttttcaacatgccacaaacgctggtcttctaa

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