Miscanthus floridulus: 136504542
Help
Entry
136504542 CDS
T10264
Name
(RefSeq) long chain acyl-CoA synthetase 6, peroxisomal-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mflo Miscanthus floridulus
Pathway
mflo00061
Fatty acid biosynthesis
mflo00071
Fatty acid degradation
mflo01100
Metabolic pathways
mflo01212
Fatty acid metabolism
mflo04146
Peroxisome
Module
mflo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
136504542
00071 Fatty acid degradation
136504542
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
136504542
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mflo01004
]
136504542
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mflo04147
]
136504542
Enzymes [BR:
mflo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
136504542
Lipid biosynthesis proteins [BR:
mflo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
136504542
Exosome [BR:
mflo04147
]
Exosomal proteins
Exosomal proteins of breast milk
136504542
Exosomal proteins of breast cancer cells
136504542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF3572
Motif
Other DBs
NCBI-GeneID:
136504542
NCBI-ProteinID:
XP_066355578
LinkDB
All DBs
Position
14:complement(5267474..5276583)
Genome browser
AA seq
690 aa
AA seq
DB search
MEDAAAHLQLQRSPPPPAGGCGLAVNPTAAEYVHAQGYSVVLPEKLQTGKWNVYRSAHSP
LRLISRYPDNPDIGTLHDNFTYAVETFTDCKYLGTRIRTDGTIGDYKWMTYGEASTSRTA
IGSGLIYHGVREGACIGLYFINRPEWIIVDHACSAYSYVSVPLYDTLGPDAVQFIVNHAA
VEAIFCVPQTLSILLSFIAQMPCVRLIVVVGGDDANMPSTPVTTGVEIITYSRLLIQGKA
SPQHFRPPKPEDIATICYTSGTTGTPKGVVLSHENLIANVAGSSLNIKFYPSDVYISYLP
LAHIYERVNQIAALHCGVAIGFYQGDNLKLMDDLAALRPTVFASVPRLYNRIYTAITNAV
KESGGLKEKLFHTAYNAKRQAILKGKNPSPVWDKLVFNKIKARLGGRVRLMSSGASPLSA
DVMEFLRICFGGEILEGYGMTETSCIISAMDVGDKSIGHVGSPIASCEVKLVDVPEMNYT
SDDQPYPRGEICVRGPIIFHSYYKDEVQTKEVIDEDGWLHTGDIGLWLPGGRLKIIDRKK
NIFKLAQGEYIAPEKIENVYAKCKFIAQCFIYGDSLNSSLVAIVAVEPEVLKAWAASEGI
QCEDLRQLCADPRARAAVLADMDSVGKEAQLRGFEFAKAVRLVAEPFTVENGLLTPTFKV
KRPQAKTYFAKEISDMYAELREAEAPRSKL
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgccgccgcccacctccagctccagcgctcgccgccgccgcccgccgggggc
tgtggcctcgccgtcaaccccaccgccgccgagtacgtccacgcgcagggctacagtgtt
gttctccctgagaaattgcaaacgggcaagtggaacgtgtaccggtccgcgcattcacct
ctaaggctgataagtagatatcccgacaacccagacattggaacactgcatgataatttc
acgtatgcagtcgagacatttacagactgtaaatacctgggaacaagaatcagaacagat
ggaacaattggagactacaaatggatgacatacggagaagctagcacgagcaggactgca
ataggttctggtcttatctatcatggagttcgtgaaggtgcatgcattggtctgtatttt
ataaacagacccgagtggattatagttgaccatgcttgttctgcatattcatatgtatct
gtgccactttatgacactcttggcccagatgctgttcaattcattgtgaaccatgcagcg
gtggaagctatattctgtgtgcctcaaactctaagcattctgctaagttttatagctcaa
atgccatgtgttcggcttatagtggtagttggtggagacgatgcaaatatgccatcaacg
ccagttactactggagtggaaatcataacttactccaggctgctcatccagggaaaggct
agtcctcaacattttcgtcctccgaaacctgaagatattgccactatttgttacactagt
ggcactactggcacgccaaagggagttgttctatctcatgagaacttaattgcaaatgta
gcaggatcaagcctgaacattaagttttacccctccgatgtgtatatctcatatctacct
ttggctcacatctacgagagggttaaccaaattgcagcactgcattgtggtgttgccatt
ggattctaccaaggggataatttgaagctcatggatgatctggctgctttgagaccaaca
gtattcgcaagtgttccccggttatataacagaatttataccgcaattacaaatgctgtg
aaggagtctggtgggctgaaagaaaaattgtttcatactgcatacaatgccaagaggcaa
gcaatccttaaagggaaaaatccatccccagtgtgggataagttggtatttaacaaaata
aaagctaggcttggtggacgagtgagacttatgagttcaggtgcttctccactgtcagca
gatgttatggaattccttaggatatgctttggtggtgaaattcttgaaggctatggaatg
acagagacatcctgtatcatatctgcaatggatgttggtgacaaatcaattggtcatgtt
ggatccccaattgcatcttgtgaggtgaaacttgtggatgtcccagaaatgaattatacg
tccgatgatcagccttatcctcgtggagaaatttgtgttagaggacctataatattccat
agttactataaagatgaagtccaaacaaaagaagtcattgacgaagatggttggttgcac
actggagacataggtctgtggctacctggagggcgtttaaagattattgataggaaaaag
aacattttcaaattagctcaaggagaatacatagctccagagaagattgaaaatgtttat
gccaaatgcaagttcattgcccaatgttttatatatggtgatagtttaaactcttcctta
gttgctattgttgcagttgaaccagaggttttgaaggcttgggctgcatctgaaggaatc
cagtgcgaagacttgagacagctttgtgctgaccctagagcaagagctgctgtcctggct
gatatggattctgttgggaaggaagcgcagctaagaggttttgagtttgctaaagctgtt
cggcttgttgctgagccattcacagtggagaatggtctcctcaccccaacattcaaggtc
aaaagaccgcaagctaagacatactttgcaaaggaaatttcagatatgtatgcagagttg
cgggaggcggaggcacccaggtcgaagttgtga
DBGET
integrated database retrieval system
