Miscanthus floridulus: 136504868
Help
Entry
136504868 CDS
T10264
Name
(RefSeq) protein spotted leaf 11-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
mflo Miscanthus floridulus
Pathway
mflo04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
136504868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mflo04121
]
136504868
Enzymes [BR:
mflo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136504868
Ubiquitin system [BR:
mflo04121
]
Ubiquitin ligases (E3)
U-box type E3
136504868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
Neurochondrin
Arm_2
zf-Nse
KAP
zf-RING_UBOX
TOR1L1_N
HEAT_EZ
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
136504868
NCBI-ProteinID:
XP_066356000
LinkDB
All DBs
Position
14:73866014..73873739
Genome browser
AA seq
658 aa
AA seq
DB search
MAGEAAERVAAAVEAVGSGGWEFRNAYRRQLLALSRRIRLLGPFAEELREARRGPAEEQE
RELAPLADALEKALDLLQLGRDGSRIFLVLDRDKVMKKFHESIAHLEQALCDFPYDKLDI
SDEVREQVELVHVQLKRAKERVDMPDDEFYNELLSLYNKSHDPSAELDILGRLSEKLHLT
TITDLTQESIALHEMVASGGGNDPGEHIEKMSMLLKKIKDFVQTQNPEMGPPVTTKLMDS
NGQPRPVNIPDEFRCPISLELMKDPVIVATGQTYERTFIEKWLASGHHTCPNTQQRMPNT
TLTPNYVLRSLIAQWCEANGVDPPKRSTQPDKPTSSCSTSERAIIDALLSKLCSADPEEQ
RSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLQTQEHAVTALLNLSIHEDNKS
SIILSGAVPGIVHVLKNGSMQARENAAATLFSLSVIDEYKVTIGGTGAIPALVVLLSEGS
PRGMKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGALLDEAMAILSILSSHPE
GKTAIGAAEPVPVLVEMIGSGSPRNRENAAAVMLHLSVHNVHLARAQECGIMVPLRELAL
NGTERGKRKAVQLLERMSRFLVMQHEDIASQQLDEIERQLTALGPNVTEADLDQLGFL
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgaggccgcggagagggtggccgccgccgtggaggcggtgggatccggtggc
tgggaattccggaacgcgtacaggcgccagctgctggcgctgtcgcggcggatccggctc
ctcggcccctttgccgaggagctccgggaggcgcgccgtgggcccgcggaggagcaggag
cgggagctggcgccgctcgccgacgcgctggagaaggcgctcgacctgctccagctcggc
cgcgacggcagcaggatcttcctggtccttgatagggataaagtaatgaagaagtttcat
gaatcaattgctcatctggagcaagccttgtgtgattttccatacgataaattggatata
tctgatgaagttagagagcaggttgagttagtgcatgtacagctcaaaagagccaaagaa
cgggttgacatgcctgatgatgagttctataatgaattactttcactgtataacaagagc
cacgacccaagtgctgaattggatatccttggaagattatcagaaaagttacacctgacg
accatcactgatctcacacaagaatcaattgctttgcatgagatggtggcatctggtggc
ggtaacgatcctggagaacacattgaaaaaatgtcaatgctattgaagaagatcaaggac
tttgtgcaaactcagaaccctgaaatgggcccgccggtgactaccaagctaatggattcc
aacgggcagccaagacctgtaaacattcctgatgagttccgttgtccaatttctcttgag
ctaatgaaagaccccgttattgttgctactggccagacatatgagcggacattcatcgag
aaatggctagcttctgggcatcatacttgtccaaatactcaacagaggatgccaaacacg
acactgacaccaaactatgttcttagaagtcttattgcgcagtggtgtgaggccaacggg
gttgatccaccgaagcgctcaacgcagcctgacaaacccacatcttcatgctctacgagt
gaacgtgctatcatcgatgctcttctctccaagttatgctctgcagatcctgaggaacag
agatcagctgctgcagagctccggctcctagcaaagcggaatgcaaataatcgtatctgc
attgctgaggctggtgccattcccttactattgagtctcctgtcgtcatctgatctgcag
actcaggaacatgctgtgactgcacttctgaacctctctatacatgaggataacaagtct
agcatcatattatctggtgctgtcccgggcatagttcatgttctgaagaatggaagcatg
caggcacgggagaatgctgcagccacccttttcagcctatcggtgattgatgaatacaaa
gtaacaattgggggaacaggagctatccctgcccttgtagttttgctaagtgagggcagc
ccacgtgggatgaaggatgcagcagctgctctattcaacttgtgtatttaccaagggaac
aagggccgtgctatacgagctggccttgtgccactcatcatggggctcgtgacaaacccc
actggtgctctgttggatgaggctatggcgatactctcaatactgtccagccaccctgag
ggtaagactgcgatcggggcagcagagcctgttcccgtgcttgtggagatgattggaagt
gggtcaccgaggaatagggagaatgctgcagctgtgatgttgcacctgtctgtgcataac
gtgcatttagctcgggcacaggagtgcggcatcatggttccgctacgggaactggccctg
aatggcacagagagggggaaaagaaaggcggtgcagctccttgagcgaatgagcagattc
ctggttatgcaacatgaggatattgcttcccaacagttggacgagatcgagcgtcaactt
actgccttaggacctaatgttacagaggctgatcttgaccaattgggatttctttaa
DBGET
integrated database retrieval system
