Miscanthus floridulus: 136505049
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Entry
136505049 CDS
T10264
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase CYP65-like
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
mflo Miscanthus floridulus
Pathway
mflo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
136505049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mflo03041
]
136505049
03110 Chaperones and folding catalysts [BR:
mflo03110
]
136505049
04121 Ubiquitin system [BR:
mflo04121
]
136505049
Enzymes [BR:
mflo01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
136505049
Spliceosome [BR:
mflo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
136505049
Complex C
U4/U6.U5 tri-SnRNP related factors
136505049
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
136505049
Chaperones and folding catalysts [BR:
mflo03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
136505049
Ubiquitin system [BR:
mflo04121
]
Ubiquitin ligases (E3)
U-box type E3
136505049
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
U-box
zf-NOSIP
Rtf2
RPA43_OB
Motif
Other DBs
NCBI-GeneID:
136505049
NCBI-ProteinID:
XP_066356228
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All DBs
Position
1:184646754..184650325
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AA seq
589 aa
AA seq
DB search
MGKKQHSKDRMFITRTEWATEWGGAKQKDVGTPFKRLPFYCCSLTFLPFEDPVCTIDGSV
FDLMSIIPYLKKFGKHPVTGAPLKHEDLIPLTFHKNSDGEFQCPVLNKVFTEFTHIVAVK
TTGNVFCYEAIQELNIKPKNWKELLTDEPFTRNDLITIQNPNVVDGKVLGEFDHVKKGLK
LEDEELQRMKDDPTYNINISGDLKQMIKDLGTEKGKEAFLQGGGGLKAQKERAAAHAAIL
ARKEKDDSKAGKEPKPNQSFSIVDAASASVHGRSAAAAKATSAEKTAARIAMHMAGERAP
VNVKLVKSRYTTGAASRSFTSTSYDPVTKNEYEYVKVERNPKKKGYIQLHTTHGDLNLEL
HCDITPRACENFITHCENGYYNGLIFHRSIKNFMIQGGDPTGTGSGGESIWGKPFKDEPN
SKLLHSGRGVVSMANSGPHTNGSQFFILYKSAPHLNFKHTVFGMVVGGLTTLSAMEKVPV
DDDDRPLEEIKILKVSIFMNPYTEPDEEEEKAKEEKKKDEDYDKVGSWYSNPGTGVAGST
STGGGVGKYLKARTAGSVDVTGSAGAADDSSKKRKATASSVEFKDFSGW
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaagcagcacagcaaggaccgcatgttcatcacgcggacggagtgggcaact
gaatggggcggcgccaagcagaaggacgtcggcacgccgttcaagcgcctccccttctac
tgttgctcactcacatttcttccatttgaggatccagtgtgcaccatcgatggaagcgtc
ttcgatttaatgagcataatcccataccttaaaaagttcgggaagcatccagtaaccgga
gcaccactcaagcacgaagatctgattcctctcacattccacaagaactcagatggtgag
tttcagtgtcctgttctgaacaaagtttttacagaattcacacacatagttgctgtaaaa
actactggaaatgtcttctgctatgaggcaatccaagaacttaacatcaagccaaaaaat
tggaaagagttgctaactgatgagcccttcactcgaaatgacttgataacgattcagaac
ccaaacgtggttgatggcaaggtccttggggaattcgaccatgtcaagaagggcctcaaa
cttgaggatgaagagttgcagcggatgaaagatgatccaacctataacataaatatttct
ggtgatcttaagcaaatgattaaggatcttgggacagaaaaaggaaaggaagcttttttg
caggggggtggtgggctgaaagctcaaaaggaaagagctgcggctcatgctgcaatttta
gcaaggaaggagaaggatgactcaaaagcaggaaaagaacctaaacctaatcaaagtttc
agtattgtggatgctgcttctgcttctgttcatggcaggagtgcagcagcagcaaaagca
acttctgctgaaaaaaccgctgctagaatcgctatgcatatggcaggggaacgagctcct
gtaaatgttaaactggtcaaaagtcgttacactactggagcagcatcacgttctttcaca
tcgacttcttatgatcctgttaccaaaaatgaatatgagtatgttaaagttgaaaggaat
ccaaagaagaaaggctacattcagctgcatacaacccatggtgatttgaatttagagctt
cattgtgatataactcctcgggcttgtgaaaatttcattacgcattgtgaaaatggttac
tacaatggtcttatcttccatcggagcatcaaaaacttcatgattcaaggcggtgatcca
actggcacaggaagtggaggagagtccatatggggtaaaccgttcaaggatgagccgaac
tcaaagctgctacattctggaagaggtgtagtcagcatggcaaattcaggccctcatacc
aacggatcccaattttttatcctgtacaagtctgcaccgcacttaaatttcaagcacacg
gtatttggcatggtcgtgggtggtttgaccacactttcagctatggaaaaggttcctgtc
gatgatgacgaccggccattggaggaaataaagattctaaaagtcagcatattcatgaat
ccttacacagagccagatgaggaagaagaaaaggcaaaggaggagaagaaaaaggatgag
gattatgataaggtgggatcatggtatagcaacccaggaactggtgttgctggttcaacg
agtactggtggtggggttggcaagtatttaaaagctcggacagctggctctgttgatgtg
actggaagtgctggtgcagccgatgattcgagcaagaagagaaaagcaactgcatccagt
gtagagttcaaagatttttctggatggtag
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