Miscanthus floridulus: 136505073
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Entry
136505073 CDS
T10264
Name
(RefSeq) small RNA degrading nuclease 5-like isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
mflo Miscanthus floridulus
Pathway
mflo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
136505073
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mflo03009
]
136505073
Ribosome biogenesis [BR:
mflo03009
]
Eukaryotic type
Pre-60S particles
RNases
136505073
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
CENP-K
Motif
Other DBs
NCBI-GeneID:
136505073
NCBI-ProteinID:
XP_066356261
LinkDB
All DBs
Position
14:28871179..28878200
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AA seq
595 aa
AA seq
DB search
MLYLQKGPRPSPTAQKKTTLGGLSCKLRERQSTRATTSAVAAASMSTPSGNGGGASSALY
DLYGPNAKPDVVFKEAALNSTLNLQDVQGLVTWVIGDGMLPSWVFVKNKPLIPKVVLLYV
PGLDAALYMSQTRLLSSLKELCGNPKPVLASSSCIPDERHTIDALLTCRVKRKRDVKTSN
QSSKPDRDGKLSSLDDLGDIPFPVTYYTLSEKDMEDNGYSFNLPGFVPTVSAPSGSSPHK
VLALDCEMCVTEAGFELTRVTLIDIKGSVVLDKLVKPANPIIDYNTRFSGITAEMLADVS
TTLQEIQEEFVGLVHKETILVGHSLENDLMALRISHGLIIDTAVLYKYNRGSRCKIALRV
LTKKFLGREIQNTGSGHDSVEDARAALELAILKIKHGPDFGSQPSLSRRKLTSILHESGK
KCSLIDDVSVLKRYSDTSCNSIAVFSDDDALSRSMKEVKNDKVAFIWTQFSGLISYFHRR
AQDPEKLKSCVAEAIALKTCDGKTASKKARSQICHELKEILCELDKKIRQLYGALPDNAM
LIVCTGHGDTPLVQRLRKMLHHEEETIDSRETIVQALGDLHAQAEVALCFCCVKH
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgctatatttgcagaaaggcccccgtccaagtccaacagcacagaaaaagacgacactc
ggagggctttcctgcaagcttcgagagcggcaaagcactagggcaaccacctcggcggtg
gcggcggcctccatgtcgaccccctccggcaacggcggcggcgcctcctccgcgctatac
gacttgtacggccctaacgcgaagcctgatgttgttttcaaggaggctgctttaaactct
acattaaatctgcaggacgttcagggtctagttacttgggttattggtgacggcatgctg
ccttcttgggtgtttgttaagaacaaacctcttatacccaaagtcgtcctactatatgtt
cctggccttgatgcagctttatatatgtcacaaactcgacttctttcttctctgaaagaa
ttatgtggcaatccaaaacctgttctagcttcaagcagctgtataccggatgagaggcac
accattgatgcgctcctaacctgcagagtaaagagaaagcgtgatgtcaaaacatcaaat
cagtcatctaaacctgacagagatggaaaactatcaagtctggatgatcttggggacata
ccatttcctgttacatattacacactttcggagaaagacatggaagataatggctactct
ttcaatttaccaggttttgtccctactgtatcagctccttcaggttcctcgccacataaa
gttcttgcacttgattgtgaaatgtgcgtgacagaagctggatttgagcttacaagagtg
acattaattgatattaaaggatcggtggtgctagataaactagttaagcctgctaatcca
atcattgattacaacacaaggttcagtggaatcactgctgagatgttggctgatgtgtcc
acaaccctacaggaaattcaggaagagtttgttggacttgtacataaagaaacaattctt
gtcggacattccttggaaaatgaccttatggcattacggatatctcatggtttaatcatc
gatacagctgttttgtacaagtataatcgagggtctcgctgtaagattgctttgcgtgtc
ttgacaaaaaaatttcttggccgggagatccagaacacaggatctgggcatgatagtgtg
gaagatgctagagctgctctagaacttgctatattgaaaatcaaacatggtcctgatttt
ggttcccaaccatcgttgtcaaggcggaaattgacatctatactgcatgagagtgggaaa
aaatgctcccttattgatgatgtgtctgttctcaagcgatattcagatacctcttgcaat
tcaattgctgttttttctgatgatgatgccctctccagatcaatgaaggaggtgaagaat
gacaaagttgccttcatttggactcaattctcaggattgatatcttacttccaccgaaga
gctcaagatccagagaagttgaaatcatgtgtcgcagaggctattgcattaaaaacatgt
gatggaaaaactgcttcaaaaaaagcaagaagtcaaatttgtcatgaattaaaggaaatt
ttgtgtgaattggataaaaagataaggcaattatatggtgccctacctgataatgctatg
cttattgtatgcactggccatggtgatactcctctagtacaaagattacggaaaatgctt
caccatgaagaagaaacaatagacagccgggaaactattgttcaagctttgggagattta
cacgcccaagccgaagttgctctatgcttctgctgcgttaaacattaa
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