KEGG   Miscanthus floridulus: 136506507
Entry
136506507         CDS       T10264                                 
Name
(RefSeq) THO complex subunit 4A-like isoform X1
  KO
K12881  THO complex subunit 4
Organism
mflo  Miscanthus floridulus
Pathway
mflo03013  Nucleocytoplasmic transport
mflo03015  mRNA surveillance pathway
mflo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mflo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    136506507
  09122 Translation
   03013 Nucleocytoplasmic transport
    136506507
   03015 mRNA surveillance pathway
    136506507
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mflo03019]
    136506507
   03041 Spliceosome [BR:mflo03041]
    136506507
Messenger RNA biogenesis [BR:mflo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     136506507
    TREX complex
     136506507
Spliceosome [BR:mflo03041]
 Complex C
  Other components
   EJC/TREX
    136506507
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    136506507
SSDB
Motif
Pfam: RRM_1 FoP_duplication REV RRM_3
Other DBs
NCBI-GeneID: 136506507
NCBI-ProteinID: XP_066357532
LinkDB
Position
15:complement(1281110..1284190)
AA seq 356 aa
MKSPLLSVSNRPPRWGGTGNKRRNRGRGRRKPGRGAEAVAGLGCLVPEKRRPGPTEAMGP
IPTTYIRQQPTHATRLSGVAAHLPPSAALLLLPPPPEKRETESMADALDMSLDDLISKSR
STHQHPGGGRPAYRGGVPAPTASRRRFNTRAAAAPYLRRATFSFKPLVRPMDYAGYRAAQ
PRPPMVSALDEPTKLYISNLDYGVSNDDIKELFSDVGDIKRYSINYDRSGRSKGTAEVVF
SRRSDALAAVKRYNNVQLDGKPMKIEIIGTNIEAPLPPTAIFSFNPPAGNFNLPFKSGPG
RGGAGGWPQSRGGFGGRGGRGQGRGRGRGEGRGEKVSVEDLDADLDKYHAAAMETI
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgaaatctcctctgctctccgtctccaatcggccgccgcgatgggggggaacggggaac
aagaggaggaaccgagggagagggaggaggaagccaggaaggggcgctgaagctgtagct
gggctgggctgcctggttcccgaaaaaagaagaccaggcccaactgaagccatggggccc
attccaacaacatacatcaggcagcagcccacgcacgcaactaggttgtctggcgtcgcg
gctcatctccctccctccgccgccctgctcctactgccgccgccgccggagaagagagag
acagagagcatggccgacgccctcgacatgtctctcgacgacctcatctccaagagcagg
agcacccaccaacaccccggcgggggacgccctgcctacagaggcggagtccccgcaccc
acggcgtcgcgacgccgcttcaacacccgcgctgccgcagcaccttacctccgccgcgca
accttctctttcaagccacttgtgcgacctatggattatgctggatatagggctgcccag
ccccggccgccgatggtgtccgccctcgacgagcccaccaagctctacatctccaacctc
gactacggcgtctcaaacgacgacatcaaggaactcttttctgatgttggtgatatcaag
cgttactctatcaactatgacaggagtggaagatcaaagggaactgcagaggttgtcttc
tctagaaggtctgatgctctagctgccgttaagaggtacaacaatgtgcagcttgatggc
aaacctatgaagattgaaatcattgggacaaacattgaggcgccactgccaccaactgct
atcttctccttcaatccgccagctggaaacttcaatttgcctttcaaaagtgggcctgga
agaggtggtgctggaggatggcctcagagcagaggtggatttggtgggcgtggtgggcgt
gggcaggggcgggggagggggaggggagagggtcgtggtgagaaagtttctgttgaagat
ctggacgcagacttggacaagtaccatgctgcagcaatggaaaccatctaa

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